Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18886 | 56881;56882;56883 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
N2AB | 17245 | 51958;51959;51960 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
N2A | 16318 | 49177;49178;49179 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
N2B | 9821 | 29686;29687;29688 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
Novex-1 | 9946 | 30061;30062;30063 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
Novex-2 | 10013 | 30262;30263;30264 | chr2:178599054;178599053;178599052 | chr2:179463781;179463780;179463779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1421176024 | -1.682 | 1.0 | N | 0.823 | 0.487 | 0.458374381611 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.5E-05 | 0 |
G/R | None | None | 1.0 | N | 0.808 | 0.444 | 0.598795731184 | gnomAD-4.0.0 | 7.16025E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.22581E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2088 | likely_benign | 0.2588 | benign | -0.806 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.492066706 | None | None | I |
G/C | 0.4583 | ambiguous | 0.5826 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
G/D | 0.3858 | ambiguous | 0.4756 | ambiguous | -1.606 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
G/E | 0.4972 | ambiguous | 0.6563 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.485710377 | None | None | I |
G/F | 0.8699 | likely_pathogenic | 0.9285 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
G/H | 0.7524 | likely_pathogenic | 0.8414 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
G/I | 0.8014 | likely_pathogenic | 0.8995 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
G/K | 0.7872 | likely_pathogenic | 0.884 | pathogenic | -1.336 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/L | 0.72 | likely_pathogenic | 0.8334 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/M | 0.7769 | likely_pathogenic | 0.8696 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
G/N | 0.5944 | likely_pathogenic | 0.6895 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
G/P | 0.9793 | likely_pathogenic | 0.9898 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/Q | 0.6438 | likely_pathogenic | 0.7598 | pathogenic | -1.231 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/R | 0.6788 | likely_pathogenic | 0.8112 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.508222404 | None | None | I |
G/S | 0.1458 | likely_benign | 0.1766 | benign | -1.233 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
G/T | 0.3928 | ambiguous | 0.5034 | ambiguous | -1.22 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/V | 0.643 | likely_pathogenic | 0.793 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.520085689 | None | None | I |
G/W | 0.809 | likely_pathogenic | 0.8977 | pathogenic | -1.468 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
G/Y | 0.7741 | likely_pathogenic | 0.86 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.