Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18888 | 56887;56888;56889 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
N2AB | 17247 | 51964;51965;51966 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
N2A | 16320 | 49183;49184;49185 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
N2B | 9823 | 29692;29693;29694 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
Novex-1 | 9948 | 30067;30068;30069 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
Novex-2 | 10015 | 30268;30269;30270 | chr2:178599048;178599047;178599046 | chr2:179463775;179463774;179463773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs755206756 | -2.841 | 0.801 | D | 0.776 | 0.524 | 0.466991082792 | gnomAD-2.1.1 | 1.44E-05 | None | None | None | None | N | None | 0 | 1.20077E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs755206756 | -2.841 | 0.801 | D | 0.776 | 0.524 | 0.466991082792 | gnomAD-4.0.0 | 1.41814E-06 | None | None | None | None | N | None | 0 | 5.72377E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | None | None | 0.801 | D | 0.781 | 0.532 | 0.497021753114 | gnomAD-4.0.0 | 7.09071E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.72182E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4192 | ambiguous | 0.4257 | ambiguous | -2.052 | Highly Destabilizing | 0.454 | N | 0.685 | prob.neutral | D | 0.543321501 | None | None | N |
P/C | 0.566 | likely_pathogenic | 0.552 | ambiguous | -1.822 | Destabilizing | 0.002 | N | 0.657 | neutral | None | None | None | None | N |
P/D | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -2.968 | Highly Destabilizing | 0.971 | D | 0.817 | deleterious | None | None | None | None | N |
P/E | 0.9934 | likely_pathogenic | 0.9936 | pathogenic | -2.853 | Highly Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
P/F | 0.9962 | likely_pathogenic | 0.9971 | pathogenic | -1.328 | Destabilizing | 0.991 | D | 0.871 | deleterious | None | None | None | None | N |
P/G | 0.9372 | likely_pathogenic | 0.9411 | pathogenic | -2.491 | Highly Destabilizing | 0.915 | D | 0.825 | deleterious | None | None | None | None | N |
P/H | 0.9898 | likely_pathogenic | 0.9927 | pathogenic | -2.136 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
P/I | 0.9341 | likely_pathogenic | 0.918 | pathogenic | -0.864 | Destabilizing | 0.949 | D | 0.851 | deleterious | None | None | None | None | N |
P/K | 0.9957 | likely_pathogenic | 0.9958 | pathogenic | -1.776 | Destabilizing | 0.971 | D | 0.817 | deleterious | None | None | None | None | N |
P/L | 0.8354 | likely_pathogenic | 0.85 | pathogenic | -0.864 | Destabilizing | 0.669 | D | 0.813 | deleterious | D | 0.549144398 | None | None | N |
P/M | 0.9519 | likely_pathogenic | 0.9511 | pathogenic | -0.911 | Destabilizing | 0.991 | D | 0.859 | deleterious | None | None | None | None | N |
P/N | 0.9924 | likely_pathogenic | 0.9925 | pathogenic | -1.915 | Destabilizing | 0.991 | D | 0.844 | deleterious | None | None | None | None | N |
P/Q | 0.9823 | likely_pathogenic | 0.9848 | pathogenic | -1.949 | Destabilizing | 0.989 | D | 0.808 | deleterious | D | 0.562439714 | None | None | N |
P/R | 0.9845 | likely_pathogenic | 0.9862 | pathogenic | -1.387 | Destabilizing | 0.989 | D | 0.845 | deleterious | D | 0.561932735 | None | None | N |
P/S | 0.8753 | likely_pathogenic | 0.8896 | pathogenic | -2.417 | Highly Destabilizing | 0.801 | D | 0.776 | deleterious | D | 0.550665335 | None | None | N |
P/T | 0.7921 | likely_pathogenic | 0.7554 | pathogenic | -2.185 | Highly Destabilizing | 0.801 | D | 0.781 | deleterious | D | 0.543321501 | None | None | N |
P/V | 0.7578 | likely_pathogenic | 0.7117 | pathogenic | -1.232 | Destabilizing | 0.842 | D | 0.821 | deleterious | None | None | None | None | N |
P/W | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -1.756 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
P/Y | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -1.452 | Destabilizing | 0.991 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.