Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18892 | 56899;56900;56901 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
N2AB | 17251 | 51976;51977;51978 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
N2A | 16324 | 49195;49196;49197 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
N2B | 9827 | 29704;29705;29706 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
Novex-1 | 9952 | 30079;30080;30081 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
Novex-2 | 10019 | 30280;30281;30282 | chr2:178599036;178599035;178599034 | chr2:179463763;179463762;179463761 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs780258242 | -0.8 | 0.898 | N | 0.494 | 0.23 | 0.255777322467 | gnomAD-2.1.1 | 4.52E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.99E-05 | None | 0 | 0 | 0 |
T/A | rs780258242 | -0.8 | 0.898 | N | 0.494 | 0.23 | 0.255777322467 | gnomAD-4.0.0 | 7.00877E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.24076E-05 | 0 |
T/I | None | None | 0.997 | N | 0.818 | 0.417 | 0.37479162749 | gnomAD-4.0.0 | 6.99567E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.124E-07 | 0 | 0 |
T/K | rs1405285641 | None | 0.993 | N | 0.743 | 0.365 | 0.341934017632 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/K | rs1405285641 | None | 0.993 | N | 0.743 | 0.365 | 0.341934017632 | gnomAD-4.0.0 | 1.26472E-06 | None | None | None | None | N | None | 0 | 1.82375E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.63848E-05 |
T/P | rs780258242 | -0.362 | 0.997 | N | 0.822 | 0.422 | 0.375326005269 | gnomAD-2.1.1 | 1.81E-05 | None | None | None | None | N | None | 2.70709E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/P | rs780258242 | -0.362 | 0.997 | N | 0.822 | 0.422 | 0.375326005269 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 1.31337E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs780258242 | -0.362 | 0.997 | N | 0.822 | 0.422 | 0.375326005269 | gnomAD-4.0.0 | 6.33354E-06 | None | None | None | None | N | None | 6.80087E-05 | 7.4118E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6408E-05 |
T/R | rs1405285641 | -0.147 | 0.993 | N | 0.82 | 0.375 | 0.403752378121 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
T/R | rs1405285641 | -0.147 | 0.993 | N | 0.82 | 0.375 | 0.403752378121 | gnomAD-4.0.0 | 5.59653E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.2992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0888 | likely_benign | 0.0909 | benign | -0.563 | Destabilizing | 0.898 | D | 0.494 | neutral | N | 0.512441051 | None | None | N |
T/C | 0.4208 | ambiguous | 0.4039 | ambiguous | -0.38 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
T/D | 0.5001 | ambiguous | 0.4737 | ambiguous | -0.061 | Destabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | N |
T/E | 0.3273 | likely_benign | 0.2885 | benign | -0.101 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/F | 0.2628 | likely_benign | 0.2593 | benign | -0.822 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
T/G | 0.2955 | likely_benign | 0.3065 | benign | -0.766 | Destabilizing | 0.966 | D | 0.641 | neutral | None | None | None | None | N |
T/H | 0.307 | likely_benign | 0.2808 | benign | -1.083 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
T/I | 0.16 | likely_benign | 0.1457 | benign | -0.133 | Destabilizing | 0.997 | D | 0.818 | deleterious | N | 0.506227154 | None | None | N |
T/K | 0.2993 | likely_benign | 0.2524 | benign | -0.605 | Destabilizing | 0.993 | D | 0.743 | deleterious | N | 0.485137019 | None | None | N |
T/L | 0.1201 | likely_benign | 0.1179 | benign | -0.133 | Destabilizing | 0.983 | D | 0.628 | neutral | None | None | None | None | N |
T/M | 0.1033 | likely_benign | 0.1039 | benign | 0.073 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
T/N | 0.1782 | likely_benign | 0.176 | benign | -0.452 | Destabilizing | 0.995 | D | 0.675 | neutral | None | None | None | None | N |
T/P | 0.6969 | likely_pathogenic | 0.6669 | pathogenic | -0.245 | Destabilizing | 0.997 | D | 0.822 | deleterious | N | 0.499440674 | None | None | N |
T/Q | 0.2477 | likely_benign | 0.2264 | benign | -0.654 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
T/R | 0.2567 | likely_benign | 0.2218 | benign | -0.337 | Destabilizing | 0.993 | D | 0.82 | deleterious | N | 0.481155352 | None | None | N |
T/S | 0.116 | likely_benign | 0.1206 | benign | -0.676 | Destabilizing | 0.362 | N | 0.347 | neutral | N | 0.502029269 | None | None | N |
T/V | 0.1166 | likely_benign | 0.109 | benign | -0.245 | Destabilizing | 0.983 | D | 0.541 | neutral | None | None | None | None | N |
T/W | 0.6514 | likely_pathogenic | 0.6227 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/Y | 0.3261 | likely_benign | 0.2979 | benign | -0.537 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.