Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18893 | 56902;56903;56904 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
N2AB | 17252 | 51979;51980;51981 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
N2A | 16325 | 49198;49199;49200 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
N2B | 9828 | 29707;29708;29709 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
Novex-1 | 9953 | 30082;30083;30084 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
Novex-2 | 10020 | 30283;30284;30285 | chr2:178599033;178599032;178599031 | chr2:179463760;179463759;179463758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs758414408 | -0.913 | 0.958 | N | 0.599 | 0.326 | 0.571207575158 | gnomAD-2.1.1 | 4.44E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.61E-06 | 0 |
V/A | rs758414408 | -0.913 | 0.958 | N | 0.599 | 0.326 | 0.571207575158 | gnomAD-4.0.0 | 1.67082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.98381E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7491 | likely_pathogenic | 0.7582 | pathogenic | -1.433 | Destabilizing | 0.958 | D | 0.599 | neutral | N | 0.515884001 | None | None | N |
V/C | 0.9339 | likely_pathogenic | 0.932 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/D | 0.9915 | likely_pathogenic | 0.9919 | pathogenic | -0.987 | Destabilizing | 0.998 | D | 0.832 | deleterious | N | 0.501939571 | None | None | N |
V/E | 0.9726 | likely_pathogenic | 0.9734 | pathogenic | -0.996 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
V/F | 0.6825 | likely_pathogenic | 0.7151 | pathogenic | -1.301 | Destabilizing | 0.988 | D | 0.829 | deleterious | N | 0.479019015 | None | None | N |
V/G | 0.9176 | likely_pathogenic | 0.9124 | pathogenic | -1.742 | Destabilizing | 0.994 | D | 0.811 | deleterious | N | 0.510142324 | None | None | N |
V/H | 0.9896 | likely_pathogenic | 0.9913 | pathogenic | -1.35 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.0669 | likely_benign | 0.0728 | benign | -0.691 | Destabilizing | 0.067 | N | 0.305 | neutral | N | 0.465361967 | None | None | N |
V/K | 0.978 | likely_pathogenic | 0.9803 | pathogenic | -1.029 | Destabilizing | 0.995 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.3595 | ambiguous | 0.4277 | ambiguous | -0.691 | Destabilizing | 0.618 | D | 0.486 | neutral | N | 0.511056971 | None | None | N |
V/M | 0.4704 | ambiguous | 0.5406 | ambiguous | -0.573 | Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | N |
V/N | 0.9635 | likely_pathogenic | 0.9672 | pathogenic | -0.815 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
V/P | 0.9404 | likely_pathogenic | 0.9362 | pathogenic | -0.903 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
V/Q | 0.9692 | likely_pathogenic | 0.9725 | pathogenic | -0.982 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.9646 | likely_pathogenic | 0.9669 | pathogenic | -0.598 | Destabilizing | 0.998 | D | 0.838 | deleterious | None | None | None | None | N |
V/S | 0.9212 | likely_pathogenic | 0.9217 | pathogenic | -1.406 | Destabilizing | 0.995 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.7652 | likely_pathogenic | 0.8027 | pathogenic | -1.289 | Destabilizing | 0.968 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/W | 0.9911 | likely_pathogenic | 0.9931 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.9606 | likely_pathogenic | 0.9652 | pathogenic | -1.125 | Destabilizing | 0.995 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.