Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1889856917;56918;56919 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
N2AB1725751994;51995;51996 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
N2A1633049213;49214;49215 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
N2B983329722;29723;29724 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
Novex-1995830097;30098;30099 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
Novex-21002530298;30299;30300 chr2:178599018;178599017;178599016chr2:179463745;179463744;179463743
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-25
  • Domain position: 15
  • Structural Position: 17
  • Q(SASA): 0.4662
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs893885472 -0.71 0.999 N 0.48 0.348 0.574775486166 gnomAD-2.1.1 1.12E-05 None None None None N None 4.22E-05 0 None 0 0 None 0 None 0 8.16E-06 1.48192E-04
R/C rs893885472 -0.71 0.999 N 0.48 0.348 0.574775486166 gnomAD-3.1.2 6.58E-06 None None None None N None 2.42E-05 0 0 0 0 None 0 0 0 0 0
R/C rs893885472 -0.71 0.999 N 0.48 0.348 0.574775486166 gnomAD-4.0.0 6.88541E-06 None None None None N None 1.34742E-05 1.72408E-05 None 0 2.25887E-05 None 0 0 5.12297E-06 1.12651E-05 1.61996E-05
R/G None None 0.485 N 0.451 0.234 0.364926071151 gnomAD-4.0.0 6.91713E-07 None None None None N None 0 0 None 0 0 None 0 1.75747E-04 0 0 0
R/H rs572453785 -1.262 0.031 N 0.203 0.104 None gnomAD-2.1.1 5.22E-05 None None None None N None 1.68535E-04 3.02E-05 None 0 1.0591E-04 None 6.99E-05 None 0 4.07E-05 0
R/H rs572453785 -1.262 0.031 N 0.203 0.104 None gnomAD-3.1.2 1.11922E-04 None None None None N None 2.65855E-04 6.56E-05 0 0 1.94628E-04 None 0 0 4.42E-05 2.07727E-04 0
R/H rs572453785 -1.262 0.031 N 0.203 0.104 None 1000 genomes 1.99681E-04 None None None None N None 0 1.4E-03 None None 0 0 None None None 0 None
R/H rs572453785 -1.262 0.031 N 0.203 0.104 None gnomAD-4.0.0 8.25614E-05 None None None None N None 2.68918E-04 5.14845E-05 None 0 6.77629E-05 None 0 1.67001E-04 7.42506E-05 8.99726E-05 1.61818E-04

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.3728 ambiguous 0.3508 ambiguous -0.445 Destabilizing 0.004 N 0.137 neutral None None None None N
R/C 0.1593 likely_benign 0.1949 benign -0.306 Destabilizing 0.999 D 0.48 neutral N 0.485118173 None None N
R/D 0.7911 likely_pathogenic 0.7832 pathogenic -0.263 Destabilizing 0.704 D 0.484 neutral None None None None N
R/E 0.4767 ambiguous 0.4373 ambiguous -0.196 Destabilizing 0.704 D 0.214 neutral None None None None N
R/F 0.6818 likely_pathogenic 0.673 pathogenic -0.611 Destabilizing 0.893 D 0.531 neutral None None None None N
R/G 0.2609 likely_benign 0.2696 benign -0.685 Destabilizing 0.485 N 0.451 neutral N 0.45329396 None None N
R/H 0.1083 likely_benign 0.1163 benign -1.117 Destabilizing 0.031 N 0.203 neutral N 0.462414875 None None N
R/I 0.4637 ambiguous 0.4616 ambiguous 0.173 Stabilizing 0.543 D 0.533 neutral None None None None N
R/K 0.1144 likely_benign 0.1082 benign -0.527 Destabilizing 0.495 N 0.255 neutral None None None None N
R/L 0.3597 ambiguous 0.3609 ambiguous 0.173 Stabilizing 0.006 N 0.161 neutral N 0.499759755 None None N
R/M 0.3933 ambiguous 0.3839 ambiguous 0.034 Stabilizing 0.893 D 0.423 neutral None None None None N
R/N 0.6077 likely_pathogenic 0.5853 pathogenic 0.024 Stabilizing 0.704 D 0.298 neutral None None None None N
R/P 0.7285 likely_pathogenic 0.7395 pathogenic -0.013 Destabilizing 0.97 D 0.487 neutral N 0.452061809 None None N
R/Q 0.1098 likely_benign 0.1151 benign -0.235 Destabilizing 0.704 D 0.321 neutral None None None None N
R/S 0.4614 ambiguous 0.4427 ambiguous -0.534 Destabilizing 0.485 N 0.377 neutral N 0.432569184 None None N
R/T 0.4211 ambiguous 0.3934 ambiguous -0.323 Destabilizing 0.704 D 0.377 neutral None None None None N
R/V 0.5083 ambiguous 0.5098 ambiguous -0.013 Destabilizing 0.329 N 0.491 neutral None None None None N
R/W 0.2721 likely_benign 0.3063 benign -0.449 Destabilizing 0.995 D 0.486 neutral None None None None N
R/Y 0.4434 ambiguous 0.4438 ambiguous -0.086 Destabilizing 0.893 D 0.489 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.