Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18900 | 56923;56924;56925 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
N2AB | 17259 | 52000;52001;52002 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
N2A | 16332 | 49219;49220;49221 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
N2B | 9835 | 29728;29729;29730 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
Novex-1 | 9960 | 30103;30104;30105 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
Novex-2 | 10027 | 30304;30305;30306 | chr2:178599012;178599011;178599010 | chr2:179463739;179463738;179463737 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1256105535 | None | 1.0 | N | 0.7 | 0.443 | 0.536661227952 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1147 | likely_benign | 0.1236 | benign | -0.47 | Destabilizing | 0.973 | D | 0.419 | neutral | N | 0.509483677 | None | None | N |
S/C | 0.116 | likely_benign | 0.1225 | benign | -0.872 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.486561248 | None | None | N |
S/D | 0.7326 | likely_pathogenic | 0.8056 | pathogenic | -1.863 | Destabilizing | 0.996 | D | 0.522 | neutral | None | None | None | None | N |
S/E | 0.7131 | likely_pathogenic | 0.7644 | pathogenic | -1.821 | Destabilizing | 0.999 | D | 0.529 | neutral | None | None | None | None | N |
S/F | 0.2535 | likely_benign | 0.2673 | benign | -0.898 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | N | 0.487130679 | None | None | N |
S/G | 0.1461 | likely_benign | 0.1662 | benign | -0.69 | Destabilizing | 0.134 | N | 0.247 | neutral | None | None | None | None | N |
S/H | 0.4796 | ambiguous | 0.4416 | ambiguous | -1.226 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/I | 0.4761 | ambiguous | 0.5325 | ambiguous | 0.011 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/K | 0.9337 | likely_pathogenic | 0.9388 | pathogenic | -0.645 | Destabilizing | 0.996 | D | 0.542 | neutral | None | None | None | None | N |
S/L | 0.2386 | likely_benign | 0.3054 | benign | 0.011 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
S/M | 0.2471 | likely_benign | 0.2975 | benign | 0.22 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
S/N | 0.2969 | likely_benign | 0.3637 | ambiguous | -1.087 | Destabilizing | 0.996 | D | 0.536 | neutral | None | None | None | None | N |
S/P | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -0.118 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.534695495 | None | None | N |
S/Q | 0.6868 | likely_pathogenic | 0.6682 | pathogenic | -1.309 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/R | 0.8999 | likely_pathogenic | 0.9065 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/T | 0.1109 | likely_benign | 0.1311 | benign | -0.81 | Destabilizing | 0.994 | D | 0.479 | neutral | N | 0.487009462 | None | None | N |
S/V | 0.4202 | ambiguous | 0.462 | ambiguous | -0.118 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/W | 0.5972 | likely_pathogenic | 0.5661 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/Y | 0.2861 | likely_benign | 0.2597 | benign | -0.624 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | N | 0.482166702 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.