Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18903 | 56932;56933;56934 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
N2AB | 17262 | 52009;52010;52011 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
N2A | 16335 | 49228;49229;49230 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
N2B | 9838 | 29737;29738;29739 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
Novex-1 | 9963 | 30112;30113;30114 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
Novex-2 | 10030 | 30313;30314;30315 | chr2:178599003;178599002;178599001 | chr2:179463730;179463729;179463728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | N | 0.639 | 0.319 | 0.435479573448 | gnomAD-4.0.0 | 3.20077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79673E-05 | None | 0 | 0 | 2.87213E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9212 | likely_pathogenic | 0.8979 | pathogenic | -1.977 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.501922663 | None | None | N |
V/C | 0.9772 | likely_pathogenic | 0.9697 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/D | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -2.587 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.525813816 | None | None | N |
V/E | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -2.273 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/F | 0.9694 | likely_pathogenic | 0.9654 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.487830879 | None | None | N |
V/G | 0.9816 | likely_pathogenic | 0.9714 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.525813816 | None | None | N |
V/H | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.592 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/I | 0.0925 | likely_benign | 0.1047 | benign | -0.175 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.490542839 | None | None | N |
V/K | 0.9989 | likely_pathogenic | 0.9982 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/L | 0.481 | ambiguous | 0.5434 | ambiguous | -0.175 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.423789411 | None | None | N |
V/M | 0.794 | likely_pathogenic | 0.8158 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/N | 0.9986 | likely_pathogenic | 0.9977 | pathogenic | -2.027 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9987 | likely_pathogenic | 0.9975 | pathogenic | -0.753 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/Q | 0.9982 | likely_pathogenic | 0.9972 | pathogenic | -1.658 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.9977 | likely_pathogenic | 0.9961 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
V/S | 0.9934 | likely_pathogenic | 0.9895 | pathogenic | -2.661 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/T | 0.9671 | likely_pathogenic | 0.9565 | pathogenic | -2.165 | Highly Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.