Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18904 | 56935;56936;56937 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
N2AB | 17263 | 52012;52013;52014 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
N2A | 16336 | 49231;49232;49233 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
N2B | 9839 | 29740;29741;29742 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
Novex-1 | 9964 | 30115;30116;30117 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
Novex-2 | 10031 | 30316;30317;30318 | chr2:178599000;178598999;178598998 | chr2:179463727;179463726;179463725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 1.0 | N | 0.714 | 0.36 | 0.202086224978 | gnomAD-4.0.0 | 1.5988E-06 | None | None | None | None | N | None | 5.69541E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5611 | ambiguous | 0.4854 | ambiguous | -1.135 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
N/C | 0.391 | ambiguous | 0.3662 | ambiguous | -0.256 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
N/D | 0.5431 | ambiguous | 0.4912 | ambiguous | -0.966 | Destabilizing | 0.999 | D | 0.594 | neutral | N | 0.486811887 | None | None | N |
N/E | 0.8032 | likely_pathogenic | 0.7187 | pathogenic | -0.83 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/F | 0.7717 | likely_pathogenic | 0.7188 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
N/G | 0.6718 | likely_pathogenic | 0.6252 | pathogenic | -1.494 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
N/H | 0.2628 | likely_benign | 0.226 | benign | -1.154 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.465263179 | None | None | N |
N/I | 0.4443 | ambiguous | 0.3712 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.490737627 | None | None | N |
N/K | 0.8322 | likely_pathogenic | 0.7597 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.437191144 | None | None | N |
N/L | 0.4735 | ambiguous | 0.4005 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
N/M | 0.5709 | likely_pathogenic | 0.5034 | ambiguous | 0.279 | Stabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
N/P | 0.9833 | likely_pathogenic | 0.9761 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
N/Q | 0.7048 | likely_pathogenic | 0.6207 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
N/R | 0.7635 | likely_pathogenic | 0.6852 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
N/S | 0.1492 | likely_benign | 0.1393 | benign | -1.022 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.382679081 | None | None | N |
N/T | 0.2703 | likely_benign | 0.2309 | benign | -0.683 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.386319606 | None | None | N |
N/V | 0.4617 | ambiguous | 0.3862 | ambiguous | -0.485 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
N/W | 0.9034 | likely_pathogenic | 0.8758 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
N/Y | 0.3826 | ambiguous | 0.3305 | benign | -0.399 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.517134794 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.