Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18906 | 56941;56942;56943 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
N2AB | 17265 | 52018;52019;52020 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
N2A | 16338 | 49237;49238;49239 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
N2B | 9841 | 29746;29747;29748 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
Novex-1 | 9966 | 30121;30122;30123 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
Novex-2 | 10033 | 30322;30323;30324 | chr2:178598994;178598993;178598992 | chr2:179463721;179463720;179463719 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1263513465 | -0.056 | 0.978 | N | 0.547 | 0.415 | 0.316788114976 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1263513465 | -0.056 | 0.978 | N | 0.547 | 0.415 | 0.316788114976 | gnomAD-4.0.0 | 6.16957E-06 | None | None | None | None | I | None | 0 | 2.24699E-05 | None | 0 | 0 | None | 0 | 0 | 7.2041E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3151 | likely_benign | 0.2385 | benign | -0.393 | Destabilizing | 0.989 | D | 0.627 | neutral | N | 0.4774244 | None | None | I |
E/C | 0.9109 | likely_pathogenic | 0.8429 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/D | 0.238 | likely_benign | 0.192 | benign | -0.489 | Destabilizing | 0.054 | N | 0.246 | neutral | N | 0.449891082 | None | None | I |
E/F | 0.917 | likely_pathogenic | 0.844 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
E/G | 0.3372 | likely_benign | 0.2628 | benign | -0.636 | Destabilizing | 0.978 | D | 0.631 | neutral | N | 0.504515001 | None | None | I |
E/H | 0.7392 | likely_pathogenic | 0.5816 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
E/I | 0.6573 | likely_pathogenic | 0.519 | ambiguous | 0.225 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
E/K | 0.3738 | ambiguous | 0.2438 | benign | 0.139 | Stabilizing | 0.978 | D | 0.547 | neutral | N | 0.424877994 | None | None | I |
E/L | 0.6406 | likely_pathogenic | 0.5035 | ambiguous | 0.225 | Stabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/M | 0.6439 | likely_pathogenic | 0.5363 | ambiguous | 0.324 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/N | 0.4387 | ambiguous | 0.3041 | benign | -0.178 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | I |
E/P | 0.9289 | likely_pathogenic | 0.8915 | pathogenic | 0.04 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/Q | 0.2591 | likely_benign | 0.185 | benign | -0.12 | Destabilizing | 0.997 | D | 0.633 | neutral | N | 0.456625053 | None | None | I |
E/R | 0.5083 | ambiguous | 0.3601 | ambiguous | 0.376 | Stabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | I |
E/S | 0.3947 | ambiguous | 0.2991 | benign | -0.371 | Destabilizing | 0.983 | D | 0.554 | neutral | None | None | None | None | I |
E/T | 0.4107 | ambiguous | 0.3127 | benign | -0.175 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/V | 0.4373 | ambiguous | 0.3232 | benign | 0.04 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.504341642 | None | None | I |
E/W | 0.9609 | likely_pathogenic | 0.9271 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/Y | 0.8392 | likely_pathogenic | 0.7103 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.