Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18907 | 56944;56945;56946 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
N2AB | 17266 | 52021;52022;52023 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
N2A | 16339 | 49240;49241;49242 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
N2B | 9842 | 29749;29750;29751 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
Novex-1 | 9967 | 30124;30125;30126 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
Novex-2 | 10034 | 30325;30326;30327 | chr2:178598991;178598990;178598989 | chr2:179463718;179463717;179463716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1238984956 | -1.295 | 0.999 | N | 0.578 | 0.186 | 0.353336612579 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1238984956 | -1.295 | 0.999 | N | 0.578 | 0.186 | 0.353336612579 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1238984956 | -1.295 | 0.999 | N | 0.578 | 0.186 | 0.353336612579 | gnomAD-4.0.0 | 6.57886E-06 | None | None | None | None | I | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1184443568 | None | 1.0 | N | 0.73 | 0.474 | 0.388010793773 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/G | rs1184443568 | None | 1.0 | N | 0.73 | 0.474 | 0.388010793773 | gnomAD-4.0.0 | 1.79982E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.46029E-05 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.644 | 0.466 | 0.330589388543 | gnomAD-4.0.0 | 1.59715E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86669E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2513 | likely_benign | 0.2615 | benign | -0.255 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.430070383 | None | None | I |
E/C | 0.9307 | likely_pathogenic | 0.9215 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
E/D | 0.3866 | ambiguous | 0.4667 | ambiguous | -0.851 | Destabilizing | 0.999 | D | 0.578 | neutral | N | 0.520463101 | None | None | I |
E/F | 0.9212 | likely_pathogenic | 0.9289 | pathogenic | 0.371 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
E/G | 0.4582 | ambiguous | 0.4727 | ambiguous | -0.591 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.471727792 | None | None | I |
E/H | 0.8638 | likely_pathogenic | 0.8792 | pathogenic | 0.35 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/I | 0.5337 | ambiguous | 0.5441 | ambiguous | 0.64 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
E/K | 0.398 | ambiguous | 0.4086 | ambiguous | -0.033 | Destabilizing | 0.999 | D | 0.644 | neutral | N | 0.459990646 | None | None | I |
E/L | 0.6262 | likely_pathogenic | 0.642 | pathogenic | 0.64 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
E/M | 0.6186 | likely_pathogenic | 0.6404 | pathogenic | 0.652 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/N | 0.6985 | likely_pathogenic | 0.7379 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/P | 0.4981 | ambiguous | 0.4928 | ambiguous | 0.364 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
E/Q | 0.3264 | likely_benign | 0.3334 | benign | -0.457 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.460684079 | None | None | I |
E/R | 0.5958 | likely_pathogenic | 0.59 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/S | 0.5566 | ambiguous | 0.5731 | pathogenic | -0.813 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
E/T | 0.5218 | ambiguous | 0.5413 | ambiguous | -0.525 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
E/V | 0.3333 | likely_benign | 0.359 | ambiguous | 0.364 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.477749687 | None | None | I |
E/W | 0.9798 | likely_pathogenic | 0.9829 | pathogenic | 0.589 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/Y | 0.8604 | likely_pathogenic | 0.8668 | pathogenic | 0.637 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.