Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18915 | 56968;56969;56970 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
N2AB | 17274 | 52045;52046;52047 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
N2A | 16347 | 49264;49265;49266 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
N2B | 9850 | 29773;29774;29775 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
Novex-1 | 9975 | 30148;30149;30150 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
Novex-2 | 10042 | 30349;30350;30351 | chr2:178598967;178598966;178598965 | chr2:179463694;179463693;179463692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2052547885 | None | 0.999 | N | 0.67 | 0.446 | 0.623294314964 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs2052547885 | None | 0.999 | N | 0.67 | 0.446 | 0.623294314964 | gnomAD-4.0.0 | 6.58007E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47124E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1004 | likely_benign | 0.1004 | benign | -0.414 | Destabilizing | 0.992 | D | 0.518 | neutral | N | 0.51682815 | None | None | I |
P/C | 0.6676 | likely_pathogenic | 0.6424 | pathogenic | -0.537 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
P/D | 0.5592 | ambiguous | 0.5692 | pathogenic | -0.313 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
P/E | 0.3088 | likely_benign | 0.3379 | benign | -0.448 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
P/F | 0.6877 | likely_pathogenic | 0.6844 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
P/G | 0.5071 | ambiguous | 0.4773 | ambiguous | -0.514 | Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | I |
P/H | 0.3167 | likely_benign | 0.3081 | benign | -0.175 | Destabilizing | 1.0 | D | 0.618 | neutral | N | 0.49385804 | None | None | I |
P/I | 0.4306 | ambiguous | 0.4131 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
P/K | 0.3745 | ambiguous | 0.3602 | ambiguous | -0.243 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
P/L | 0.1667 | likely_benign | 0.1688 | benign | -0.313 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.499391449 | None | None | I |
P/M | 0.3765 | ambiguous | 0.356 | ambiguous | -0.198 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
P/N | 0.4801 | ambiguous | 0.4657 | ambiguous | 0.004 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/Q | 0.2153 | likely_benign | 0.2105 | benign | -0.297 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
P/R | 0.2661 | likely_benign | 0.2615 | benign | 0.274 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.477893379 | None | None | I |
P/S | 0.1978 | likely_benign | 0.1958 | benign | -0.329 | Destabilizing | 0.957 | D | 0.368 | neutral | N | 0.473828001 | None | None | I |
P/T | 0.1605 | likely_benign | 0.1537 | benign | -0.369 | Destabilizing | 0.998 | D | 0.629 | neutral | N | 0.518078944 | None | None | I |
P/V | 0.275 | likely_benign | 0.2606 | benign | -0.313 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/W | 0.82 | likely_pathogenic | 0.8094 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
P/Y | 0.6699 | likely_pathogenic | 0.642 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.