Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18920 | 56983;56984;56985 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
N2AB | 17279 | 52060;52061;52062 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
N2A | 16352 | 49279;49280;49281 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
N2B | 9855 | 29788;29789;29790 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
Novex-1 | 9980 | 30163;30164;30165 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
Novex-2 | 10047 | 30364;30365;30366 | chr2:178598952;178598951;178598950 | chr2:179463679;179463678;179463677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | rs1425662810 | -1.767 | 0.999 | N | 0.801 | 0.427 | 0.60221348894 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
W/R | rs1425662810 | -1.767 | 0.999 | N | 0.801 | 0.427 | 0.60221348894 | gnomAD-4.0.0 | 1.59347E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86043E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9707 | likely_pathogenic | 0.946 | pathogenic | -3.118 | Highly Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
W/C | 0.9112 | likely_pathogenic | 0.8778 | pathogenic | -1.425 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.480557919 | None | None | N |
W/D | 0.9967 | likely_pathogenic | 0.9925 | pathogenic | -2.989 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
W/E | 0.9931 | likely_pathogenic | 0.985 | pathogenic | -2.885 | Highly Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
W/F | 0.3332 | likely_benign | 0.3018 | benign | -1.858 | Destabilizing | 0.171 | N | 0.394 | neutral | None | None | None | None | N |
W/G | 0.9732 | likely_pathogenic | 0.9477 | pathogenic | -3.334 | Highly Destabilizing | 0.999 | D | 0.672 | neutral | N | 0.469683263 | None | None | N |
W/H | 0.8256 | likely_pathogenic | 0.7705 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
W/I | 0.7537 | likely_pathogenic | 0.6002 | pathogenic | -2.289 | Highly Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
W/K | 0.994 | likely_pathogenic | 0.9875 | pathogenic | -2.062 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
W/L | 0.7146 | likely_pathogenic | 0.577 | pathogenic | -2.289 | Highly Destabilizing | 0.961 | D | 0.653 | neutral | N | 0.418834669 | None | None | N |
W/M | 0.8838 | likely_pathogenic | 0.8101 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
W/N | 0.9796 | likely_pathogenic | 0.9671 | pathogenic | -2.636 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
W/P | 0.9996 | likely_pathogenic | 0.999 | pathogenic | -2.592 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
W/Q | 0.9831 | likely_pathogenic | 0.9693 | pathogenic | -2.559 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
W/R | 0.9836 | likely_pathogenic | 0.9684 | pathogenic | -1.659 | Destabilizing | 0.999 | D | 0.801 | deleterious | N | 0.431281105 | None | None | N |
W/S | 0.9389 | likely_pathogenic | 0.8992 | pathogenic | -2.862 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.441594099 | None | None | N |
W/T | 0.9544 | likely_pathogenic | 0.908 | pathogenic | -2.698 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
W/V | 0.8001 | likely_pathogenic | 0.6814 | pathogenic | -2.592 | Highly Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
W/Y | 0.4983 | ambiguous | 0.4342 | ambiguous | -1.645 | Destabilizing | 0.971 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.