Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18923 | 56992;56993;56994 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
N2AB | 17282 | 52069;52070;52071 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
N2A | 16355 | 49288;49289;49290 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
N2B | 9858 | 29797;29798;29799 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
Novex-1 | 9983 | 30172;30173;30174 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
Novex-2 | 10050 | 30373;30374;30375 | chr2:178598943;178598942;178598941 | chr2:179463670;179463669;179463668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs2052539328 | None | 0.017 | N | 0.375 | 0.139 | 0.379707525713 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/I | rs2052539328 | None | 0.017 | N | 0.375 | 0.139 | 0.379707525713 | gnomAD-4.0.0 | 6.09062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.02494E-06 | 0 | 3.40252E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6197 | likely_pathogenic | 0.6898 | pathogenic | -1.966 | Destabilizing | 0.028 | N | 0.407 | neutral | None | None | None | None | N |
M/C | 0.6316 | likely_pathogenic | 0.6219 | pathogenic | -2.33 | Highly Destabilizing | 0.942 | D | 0.618 | neutral | None | None | None | None | N |
M/D | 0.9922 | likely_pathogenic | 0.9922 | pathogenic | -2.166 | Highly Destabilizing | 0.385 | N | 0.619 | neutral | None | None | None | None | N |
M/E | 0.8119 | likely_pathogenic | 0.8225 | pathogenic | -1.898 | Destabilizing | 0.119 | N | 0.511 | neutral | None | None | None | None | N |
M/F | 0.4377 | ambiguous | 0.4806 | ambiguous | -0.584 | Destabilizing | 0.428 | N | 0.569 | neutral | None | None | None | None | N |
M/G | 0.8912 | likely_pathogenic | 0.9032 | pathogenic | -2.464 | Highly Destabilizing | 0.385 | N | 0.564 | neutral | None | None | None | None | N |
M/H | 0.7219 | likely_pathogenic | 0.7204 | pathogenic | -2.239 | Highly Destabilizing | 0.842 | D | 0.641 | neutral | None | None | None | None | N |
M/I | 0.4881 | ambiguous | 0.5588 | ambiguous | -0.518 | Destabilizing | 0.017 | N | 0.375 | neutral | N | 0.421336257 | None | None | N |
M/K | 0.2776 | likely_benign | 0.2505 | benign | -1.357 | Destabilizing | 0.001 | N | 0.255 | neutral | N | 0.377873481 | None | None | N |
M/L | 0.2006 | likely_benign | 0.2267 | benign | -0.518 | Destabilizing | None | N | 0.136 | neutral | N | 0.427664796 | None | None | N |
M/N | 0.8846 | likely_pathogenic | 0.8978 | pathogenic | -1.903 | Destabilizing | 0.236 | N | 0.567 | neutral | None | None | None | None | N |
M/P | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -0.985 | Destabilizing | 0.822 | D | 0.637 | neutral | None | None | None | None | N |
M/Q | 0.343 | ambiguous | 0.3398 | benign | -1.51 | Destabilizing | 0.236 | N | 0.481 | neutral | None | None | None | None | N |
M/R | 0.3008 | likely_benign | 0.2889 | benign | -1.586 | Destabilizing | None | N | 0.278 | neutral | N | 0.352804465 | None | None | N |
M/S | 0.7556 | likely_pathogenic | 0.7966 | pathogenic | -2.373 | Highly Destabilizing | 0.119 | N | 0.427 | neutral | None | None | None | None | N |
M/T | 0.5049 | ambiguous | 0.5619 | ambiguous | -1.971 | Destabilizing | 0.092 | N | 0.428 | neutral | N | 0.470879643 | None | None | N |
M/V | 0.1559 | likely_benign | 0.1818 | benign | -0.985 | Destabilizing | None | N | 0.161 | neutral | N | 0.412311342 | None | None | N |
M/W | 0.7585 | likely_pathogenic | 0.78 | pathogenic | -0.994 | Destabilizing | 0.942 | D | 0.621 | neutral | None | None | None | None | N |
M/Y | 0.6118 | likely_pathogenic | 0.6393 | pathogenic | -0.914 | Destabilizing | 0.603 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.