Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18933 | 57022;57023;57024 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
N2AB | 17292 | 52099;52100;52101 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
N2A | 16365 | 49318;49319;49320 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
N2B | 9868 | 29827;29828;29829 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
Novex-1 | 9993 | 30202;30203;30204 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
Novex-2 | 10060 | 30403;30404;30405 | chr2:178598913;178598912;178598911 | chr2:179463640;179463639;179463638 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs780239769 | -1.723 | 1.0 | N | 0.708 | 0.352 | 0.593343648767 | gnomAD-4.0.0 | 3.42228E-06 | None | None | None | None | N | None | 2.99043E-05 | 0 | None | 0 | 5.05587E-05 | None | 0 | 0 | 1.7993E-06 | 0 | 0 |
R/I | None | None | 1.0 | N | 0.765 | 0.38 | 0.672838725995 | gnomAD-4.0.0 | 1.59263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86015E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9657 | likely_pathogenic | 0.9302 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
R/C | 0.8557 | likely_pathogenic | 0.7988 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
R/D | 0.9932 | likely_pathogenic | 0.9895 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
R/E | 0.9667 | likely_pathogenic | 0.9386 | pathogenic | 0.134 | Stabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
R/F | 0.985 | likely_pathogenic | 0.9762 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
R/G | 0.9674 | likely_pathogenic | 0.9413 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.469571586 | None | None | N |
R/H | 0.6825 | likely_pathogenic | 0.6139 | pathogenic | -1.431 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
R/I | 0.9223 | likely_pathogenic | 0.8661 | pathogenic | 0.221 | Stabilizing | 1.0 | D | 0.765 | deleterious | N | 0.514363848 | None | None | N |
R/K | 0.3085 | likely_benign | 0.2686 | benign | -0.607 | Destabilizing | 0.997 | D | 0.509 | neutral | N | 0.474440023 | None | None | N |
R/L | 0.8627 | likely_pathogenic | 0.8045 | pathogenic | 0.221 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
R/M | 0.917 | likely_pathogenic | 0.8618 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
R/N | 0.9862 | likely_pathogenic | 0.9799 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/P | 0.8923 | likely_pathogenic | 0.8621 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
R/Q | 0.6143 | likely_pathogenic | 0.5131 | ambiguous | -0.308 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
R/S | 0.991 | likely_pathogenic | 0.9839 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.501682552 | None | None | N |
R/T | 0.9555 | likely_pathogenic | 0.9275 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.478613692 | None | None | N |
R/V | 0.9228 | likely_pathogenic | 0.8781 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
R/W | 0.8643 | likely_pathogenic | 0.8301 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
R/Y | 0.9535 | likely_pathogenic | 0.9388 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.