Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18934 | 57025;57026;57027 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
N2AB | 17293 | 52102;52103;52104 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
N2A | 16366 | 49321;49322;49323 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
N2B | 9869 | 29830;29831;29832 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
Novex-1 | 9994 | 30205;30206;30207 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
Novex-2 | 10061 | 30406;30407;30408 | chr2:178598910;178598909;178598908 | chr2:179463637;179463636;179463635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs772344497 | -0.334 | 0.898 | N | 0.426 | 0.138 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | I | None | 1.65865E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs772344497 | -0.334 | 0.898 | N | 0.426 | 0.138 | None | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | I | None | 1.69074E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs772344497 | -0.334 | 0.898 | N | 0.426 | 0.138 | None | gnomAD-4.0.0 | 1.28221E-05 | None | None | None | None | I | None | 1.69325E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4511 | ambiguous | 0.4303 | ambiguous | -1.715 | Destabilizing | 0.977 | D | 0.498 | neutral | N | 0.47442138 | None | None | I |
V/C | 0.8017 | likely_pathogenic | 0.7804 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
V/D | 0.9812 | likely_pathogenic | 0.9761 | pathogenic | -1.841 | Destabilizing | 0.999 | D | 0.847 | deleterious | N | 0.508262084 | None | None | I |
V/E | 0.9127 | likely_pathogenic | 0.9122 | pathogenic | -1.723 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | I |
V/F | 0.7184 | likely_pathogenic | 0.7023 | pathogenic | -1.154 | Destabilizing | 0.993 | D | 0.839 | deleterious | N | 0.474456203 | None | None | I |
V/G | 0.7859 | likely_pathogenic | 0.7052 | pathogenic | -2.143 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.500121783 | None | None | I |
V/H | 0.977 | likely_pathogenic | 0.9731 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/I | 0.0945 | likely_benign | 0.1213 | benign | -0.58 | Destabilizing | 0.117 | N | 0.335 | neutral | N | 0.492313708 | None | None | I |
V/K | 0.9583 | likely_pathogenic | 0.9542 | pathogenic | -1.472 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | I |
V/L | 0.5389 | ambiguous | 0.5336 | ambiguous | -0.58 | Destabilizing | 0.898 | D | 0.426 | neutral | N | 0.504896216 | None | None | I |
V/M | 0.4681 | ambiguous | 0.5383 | ambiguous | -0.412 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/N | 0.9156 | likely_pathogenic | 0.9067 | pathogenic | -1.531 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | I |
V/P | 0.9743 | likely_pathogenic | 0.9668 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
V/Q | 0.9069 | likely_pathogenic | 0.8982 | pathogenic | -1.53 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
V/R | 0.9454 | likely_pathogenic | 0.9337 | pathogenic | -1.096 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | I |
V/S | 0.7881 | likely_pathogenic | 0.7558 | pathogenic | -2.092 | Highly Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | I |
V/T | 0.6692 | likely_pathogenic | 0.6619 | pathogenic | -1.842 | Destabilizing | 0.983 | D | 0.612 | neutral | None | None | None | None | I |
V/W | 0.9901 | likely_pathogenic | 0.9893 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
V/Y | 0.9551 | likely_pathogenic | 0.9492 | pathogenic | -1.145 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.