Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18940 | 57043;57044;57045 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
N2AB | 17299 | 52120;52121;52122 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
N2A | 16372 | 49339;49340;49341 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
N2B | 9875 | 29848;29849;29850 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
Novex-1 | 10000 | 30223;30224;30225 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
Novex-2 | 10067 | 30424;30425;30426 | chr2:178598892;178598891;178598890 | chr2:179463619;179463618;179463617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.722 | N | 0.603 | 0.132 | 0.186928172975 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/N | None | None | 0.722 | N | 0.597 | 0.135 | 0.112648838833 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4703 | ambiguous | 0.5743 | pathogenic | 0.06 | Stabilizing | 0.775 | D | 0.617 | neutral | None | None | None | None | I |
K/C | 0.7662 | likely_pathogenic | 0.8515 | pathogenic | -0.322 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/D | 0.7736 | likely_pathogenic | 0.7989 | pathogenic | -0.037 | Destabilizing | 0.923 | D | 0.628 | neutral | None | None | None | None | I |
K/E | 0.3331 | likely_benign | 0.4045 | ambiguous | -0.024 | Destabilizing | 0.722 | D | 0.603 | neutral | N | 0.441362025 | None | None | I |
K/F | 0.8708 | likely_pathogenic | 0.913 | pathogenic | -0.149 | Destabilizing | 0.987 | D | 0.696 | prob.neutral | None | None | None | None | I |
K/G | 0.5846 | likely_pathogenic | 0.6804 | pathogenic | -0.125 | Destabilizing | 0.775 | D | 0.611 | neutral | None | None | None | None | I |
K/H | 0.3649 | ambiguous | 0.4393 | ambiguous | -0.274 | Destabilizing | 0.961 | D | 0.665 | neutral | None | None | None | None | I |
K/I | 0.5898 | likely_pathogenic | 0.6521 | pathogenic | 0.471 | Stabilizing | 0.949 | D | 0.707 | prob.neutral | N | 0.467257761 | None | None | I |
K/L | 0.5085 | ambiguous | 0.6093 | pathogenic | 0.471 | Stabilizing | 0.775 | D | 0.611 | neutral | None | None | None | None | I |
K/M | 0.4512 | ambiguous | 0.5363 | ambiguous | 0.065 | Stabilizing | 0.996 | D | 0.66 | neutral | None | None | None | None | I |
K/N | 0.6316 | likely_pathogenic | 0.6944 | pathogenic | 0.117 | Stabilizing | 0.722 | D | 0.597 | neutral | N | 0.453003171 | None | None | I |
K/P | 0.5047 | ambiguous | 0.5868 | pathogenic | 0.361 | Stabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | I |
K/Q | 0.1715 | likely_benign | 0.2109 | benign | None | Stabilizing | 0.722 | D | 0.615 | neutral | N | 0.442863535 | None | None | I |
K/R | 0.076 | likely_benign | 0.0887 | benign | -0.038 | Destabilizing | 0.003 | N | 0.17 | neutral | N | 0.393570866 | None | None | I |
K/S | 0.5757 | likely_pathogenic | 0.6667 | pathogenic | -0.304 | Destabilizing | 0.775 | D | 0.575 | neutral | None | None | None | None | I |
K/T | 0.2886 | likely_benign | 0.3595 | ambiguous | -0.148 | Destabilizing | 0.722 | D | 0.61 | neutral | N | 0.394704229 | None | None | I |
K/V | 0.5094 | ambiguous | 0.5687 | pathogenic | 0.361 | Stabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | I |
K/W | 0.8061 | likely_pathogenic | 0.886 | pathogenic | -0.221 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/Y | 0.7675 | likely_pathogenic | 0.8054 | pathogenic | 0.137 | Stabilizing | 0.987 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.