Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18942 | 57049;57050;57051 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
N2AB | 17301 | 52126;52127;52128 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
N2A | 16374 | 49345;49346;49347 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
N2B | 9877 | 29854;29855;29856 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
Novex-1 | 10002 | 30229;30230;30231 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
Novex-2 | 10069 | 30430;30431;30432 | chr2:178598886;178598885;178598884 | chr2:179463613;179463612;179463611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.811 | N | 0.525 | 0.316 | 0.687947222005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3716 | ambiguous | 0.2835 | benign | -0.193 | Destabilizing | 0.737 | D | 0.427 | neutral | None | None | None | None | N |
M/C | 0.7656 | likely_pathogenic | 0.7098 | pathogenic | -0.45 | Destabilizing | 0.993 | D | 0.566 | neutral | None | None | None | None | N |
M/D | 0.823 | likely_pathogenic | 0.7148 | pathogenic | 0.51 | Stabilizing | 0.98 | D | 0.608 | neutral | None | None | None | None | N |
M/E | 0.5571 | ambiguous | 0.4448 | ambiguous | 0.457 | Stabilizing | 0.872 | D | 0.57 | neutral | None | None | None | None | N |
M/F | 0.4287 | ambiguous | 0.3578 | ambiguous | 0.048 | Stabilizing | 0.872 | D | 0.485 | neutral | None | None | None | None | N |
M/G | 0.5739 | likely_pathogenic | 0.4675 | ambiguous | -0.342 | Destabilizing | 0.932 | D | 0.559 | neutral | None | None | None | None | N |
M/H | 0.6151 | likely_pathogenic | 0.4784 | ambiguous | 0.383 | Stabilizing | 0.993 | D | 0.58 | neutral | None | None | None | None | N |
M/I | 0.5485 | ambiguous | 0.4539 | ambiguous | 0.096 | Stabilizing | 0.514 | D | 0.365 | neutral | N | 0.498831461 | None | None | N |
M/K | 0.2496 | likely_benign | 0.2022 | benign | 0.502 | Stabilizing | 0.514 | D | 0.476 | neutral | N | 0.455464686 | None | None | N |
M/L | 0.1351 | likely_benign | 0.1312 | benign | 0.096 | Stabilizing | 0.002 | N | 0.189 | neutral | N | 0.42038932 | None | None | N |
M/N | 0.5526 | ambiguous | 0.4174 | ambiguous | 0.58 | Stabilizing | 0.932 | D | 0.585 | neutral | None | None | None | None | N |
M/P | 0.6789 | likely_pathogenic | 0.5414 | ambiguous | 0.027 | Stabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | N |
M/Q | 0.2764 | likely_benign | 0.2035 | benign | 0.45 | Stabilizing | 0.872 | D | 0.481 | neutral | None | None | None | None | N |
M/R | 0.2688 | likely_benign | 0.217 | benign | 0.924 | Stabilizing | 0.016 | N | 0.329 | neutral | N | 0.399534046 | None | None | N |
M/S | 0.4497 | ambiguous | 0.3402 | ambiguous | 0.143 | Stabilizing | 0.932 | D | 0.541 | neutral | None | None | None | None | N |
M/T | 0.2994 | likely_benign | 0.2244 | benign | 0.192 | Stabilizing | 0.811 | D | 0.525 | neutral | N | 0.389221052 | None | None | N |
M/V | 0.1081 | likely_benign | 0.0954 | benign | 0.027 | Stabilizing | 0.316 | N | 0.32 | neutral | N | 0.479378909 | None | None | N |
M/W | 0.7579 | likely_pathogenic | 0.6977 | pathogenic | 0.018 | Stabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
M/Y | 0.6908 | likely_pathogenic | 0.5765 | pathogenic | 0.212 | Stabilizing | 0.993 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.