Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18943 | 57052;57053;57054 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
N2AB | 17302 | 52129;52130;52131 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
N2A | 16375 | 49348;49349;49350 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
N2B | 9878 | 29857;29858;29859 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
Novex-1 | 10003 | 30232;30233;30234 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
Novex-2 | 10070 | 30433;30434;30435 | chr2:178598883;178598882;178598881 | chr2:179463610;179463609;179463608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.005 | N | 0.133 | 0.115 | 0.112648838833 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85992E-06 | 0 | 0 |
T/N | None | None | 0.966 | N | 0.459 | 0.264 | 0.352048277211 | gnomAD-4.0.0 | 4.77683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0849 | likely_benign | 0.0823 | benign | -0.153 | Destabilizing | 0.005 | N | 0.133 | neutral | N | 0.492790923 | None | None | N |
T/C | 0.4818 | ambiguous | 0.4802 | ambiguous | -0.544 | Destabilizing | 0.998 | D | 0.423 | neutral | None | None | None | None | N |
T/D | 0.4573 | ambiguous | 0.4178 | ambiguous | -0.193 | Destabilizing | 0.915 | D | 0.411 | neutral | None | None | None | None | N |
T/E | 0.3805 | ambiguous | 0.3476 | ambiguous | -0.283 | Destabilizing | 0.842 | D | 0.418 | neutral | None | None | None | None | N |
T/F | 0.385 | ambiguous | 0.3508 | ambiguous | -0.852 | Destabilizing | 0.974 | D | 0.495 | neutral | None | None | None | None | N |
T/G | 0.2425 | likely_benign | 0.1874 | benign | -0.18 | Destabilizing | 0.728 | D | 0.432 | neutral | None | None | None | None | N |
T/H | 0.2973 | likely_benign | 0.2675 | benign | -0.233 | Destabilizing | 0.998 | D | 0.49 | neutral | None | None | None | None | N |
T/I | 0.2744 | likely_benign | 0.2471 | benign | -0.196 | Destabilizing | 0.934 | D | 0.454 | neutral | N | 0.477322826 | None | None | N |
T/K | 0.3013 | likely_benign | 0.2868 | benign | -0.375 | Destabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | N |
T/L | 0.1305 | likely_benign | 0.1194 | benign | -0.196 | Destabilizing | 0.842 | D | 0.396 | neutral | None | None | None | None | N |
T/M | 0.1161 | likely_benign | 0.12 | benign | -0.351 | Destabilizing | 0.998 | D | 0.433 | neutral | None | None | None | None | N |
T/N | 0.1362 | likely_benign | 0.1189 | benign | -0.203 | Destabilizing | 0.966 | D | 0.459 | neutral | N | 0.463300481 | None | None | N |
T/P | 0.0647 | likely_benign | 0.0632 | benign | -0.161 | Destabilizing | 0.002 | N | 0.202 | neutral | N | 0.447693352 | None | None | N |
T/Q | 0.2474 | likely_benign | 0.2225 | benign | -0.387 | Destabilizing | 0.974 | D | 0.467 | neutral | None | None | None | None | N |
T/R | 0.2888 | likely_benign | 0.2865 | benign | -0.067 | Destabilizing | 0.974 | D | 0.453 | neutral | None | None | None | None | N |
T/S | 0.1293 | likely_benign | 0.1125 | benign | -0.349 | Destabilizing | 0.454 | N | 0.463 | neutral | N | 0.489097257 | None | None | N |
T/V | 0.188 | likely_benign | 0.1705 | benign | -0.161 | Destabilizing | 0.728 | D | 0.419 | neutral | None | None | None | None | N |
T/W | 0.7297 | likely_pathogenic | 0.7116 | pathogenic | -0.972 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
T/Y | 0.4051 | ambiguous | 0.3619 | ambiguous | -0.648 | Destabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.