Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18946 | 57061;57062;57063 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
N2AB | 17305 | 52138;52139;52140 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
N2A | 16378 | 49357;49358;49359 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
N2B | 9881 | 29866;29867;29868 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
Novex-1 | 10006 | 30241;30242;30243 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
Novex-2 | 10073 | 30442;30443;30444 | chr2:178598874;178598873;178598872 | chr2:179463601;179463600;179463599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.994 | N | 0.397 | 0.243 | 0.480574121323 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4125 | ambiguous | 0.3686 | ambiguous | -1.608 | Destabilizing | 0.994 | D | 0.397 | neutral | N | 0.485960952 | None | None | N |
V/C | 0.7916 | likely_pathogenic | 0.7365 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.533 | neutral | None | None | None | None | N |
V/D | 0.6587 | likely_pathogenic | 0.6144 | pathogenic | -1.847 | Destabilizing | 0.994 | D | 0.527 | neutral | N | 0.464836318 | None | None | N |
V/E | 0.545 | ambiguous | 0.5047 | ambiguous | -1.634 | Destabilizing | 0.998 | D | 0.441 | neutral | None | None | None | None | N |
V/F | 0.3044 | likely_benign | 0.2902 | benign | -0.936 | Destabilizing | 0.999 | D | 0.497 | neutral | N | 0.461622654 | None | None | N |
V/G | 0.4676 | ambiguous | 0.3933 | ambiguous | -2.14 | Highly Destabilizing | 0.989 | D | 0.507 | neutral | N | 0.505162788 | None | None | N |
V/H | 0.8078 | likely_pathogenic | 0.757 | pathogenic | -1.932 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
V/I | 0.0851 | likely_benign | 0.0881 | benign | -0.141 | Destabilizing | 0.998 | D | 0.415 | neutral | N | 0.475186598 | None | None | N |
V/K | 0.6192 | likely_pathogenic | 0.5708 | pathogenic | -1.18 | Destabilizing | 0.998 | D | 0.453 | neutral | None | None | None | None | N |
V/L | 0.3681 | ambiguous | 0.3645 | ambiguous | -0.141 | Destabilizing | 0.987 | D | 0.421 | neutral | N | 0.377041188 | None | None | N |
V/M | 0.2528 | likely_benign | 0.2451 | benign | -0.259 | Destabilizing | 1.0 | D | 0.486 | neutral | None | None | None | None | N |
V/N | 0.4319 | ambiguous | 0.3397 | benign | -1.438 | Destabilizing | 0.611 | D | 0.375 | neutral | None | None | None | None | N |
V/P | 0.8334 | likely_pathogenic | 0.7294 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.529 | neutral | None | None | None | None | N |
V/Q | 0.5674 | likely_pathogenic | 0.5048 | ambiguous | -1.265 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
V/R | 0.5957 | likely_pathogenic | 0.5501 | ambiguous | -1.173 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
V/S | 0.4737 | ambiguous | 0.3915 | ambiguous | -2.087 | Highly Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
V/T | 0.3404 | ambiguous | 0.2975 | benign | -1.714 | Destabilizing | 0.992 | D | 0.389 | neutral | None | None | None | None | N |
V/W | 0.9184 | likely_pathogenic | 0.9146 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
V/Y | 0.7297 | likely_pathogenic | 0.6884 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.