Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18957 | 57094;57095;57096 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
N2AB | 17316 | 52171;52172;52173 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
N2A | 16389 | 49390;49391;49392 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
N2B | 9892 | 29899;29900;29901 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
Novex-1 | 10017 | 30274;30275;30276 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
Novex-2 | 10084 | 30475;30476;30477 | chr2:178598841;178598840;178598839 | chr2:179463568;179463567;179463566 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.188 | N | 0.437 | 0.276 | 0.518367700685 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0971 | likely_benign | 0.0985 | benign | -0.878 | Destabilizing | 0.001 | N | 0.084 | neutral | N | 0.432785402 | None | None | N |
S/C | 0.1105 | likely_benign | 0.1013 | benign | -0.655 | Destabilizing | 0.78 | D | 0.375 | neutral | N | 0.497722314 | None | None | N |
S/D | 0.809 | likely_pathogenic | 0.7923 | pathogenic | -0.814 | Destabilizing | 0.149 | N | 0.385 | neutral | None | None | None | None | N |
S/E | 0.8246 | likely_pathogenic | 0.8057 | pathogenic | -0.773 | Destabilizing | 0.149 | N | 0.331 | neutral | None | None | None | None | N |
S/F | 0.4235 | ambiguous | 0.4237 | ambiguous | -1.031 | Destabilizing | 0.188 | N | 0.437 | neutral | N | 0.481385645 | None | None | N |
S/G | 0.145 | likely_benign | 0.1488 | benign | -1.164 | Destabilizing | 0.035 | N | 0.293 | neutral | None | None | None | None | N |
S/H | 0.5781 | likely_pathogenic | 0.5317 | ambiguous | -1.65 | Destabilizing | 0.38 | N | 0.379 | neutral | None | None | None | None | N |
S/I | 0.3492 | ambiguous | 0.3101 | benign | -0.21 | Destabilizing | 0.081 | N | 0.427 | neutral | None | None | None | None | N |
S/K | 0.9094 | likely_pathogenic | 0.8847 | pathogenic | -0.773 | Destabilizing | 0.149 | N | 0.329 | neutral | None | None | None | None | N |
S/L | 0.1611 | likely_benign | 0.1636 | benign | -0.21 | Destabilizing | 0.081 | N | 0.343 | neutral | None | None | None | None | N |
S/M | 0.2452 | likely_benign | 0.2409 | benign | 0.102 | Stabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | N |
S/N | 0.2473 | likely_benign | 0.2258 | benign | -0.953 | Destabilizing | 0.149 | N | 0.417 | neutral | None | None | None | None | N |
S/P | 0.9766 | likely_pathogenic | 0.9674 | pathogenic | -0.398 | Destabilizing | 0.484 | N | 0.383 | neutral | N | 0.492653045 | None | None | N |
S/Q | 0.6925 | likely_pathogenic | 0.6566 | pathogenic | -1.051 | Destabilizing | 0.555 | D | 0.384 | neutral | None | None | None | None | N |
S/R | 0.8616 | likely_pathogenic | 0.8315 | pathogenic | -0.717 | Destabilizing | 0.38 | N | 0.398 | neutral | None | None | None | None | N |
S/T | 0.1243 | likely_benign | 0.1166 | benign | -0.867 | Destabilizing | None | N | 0.137 | neutral | N | 0.419983889 | None | None | N |
S/V | 0.3041 | likely_benign | 0.2738 | benign | -0.398 | Destabilizing | 0.081 | N | 0.33 | neutral | None | None | None | None | N |
S/W | 0.6213 | likely_pathogenic | 0.6043 | pathogenic | -1.054 | Destabilizing | 0.824 | D | 0.465 | neutral | None | None | None | None | N |
S/Y | 0.3712 | ambiguous | 0.3408 | ambiguous | -0.754 | Destabilizing | None | N | 0.255 | neutral | N | 0.481132155 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.