Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18961 | 57106;57107;57108 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
N2AB | 17320 | 52183;52184;52185 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
N2A | 16393 | 49402;49403;49404 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
N2B | 9896 | 29911;29912;29913 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
Novex-1 | 10021 | 30286;30287;30288 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
Novex-2 | 10088 | 30487;30488;30489 | chr2:178598829;178598828;178598827 | chr2:179463556;179463555;179463554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.885 | N | 0.711 | 0.422 | 0.607789150232 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -3.127 | Highly Destabilizing | 0.953 | D | 0.749 | deleterious | None | None | None | None | N |
F/C | 0.9809 | likely_pathogenic | 0.977 | pathogenic | -1.895 | Destabilizing | 0.999 | D | 0.765 | deleterious | D | 0.545656499 | None | None | N |
F/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.89 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
F/E | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.649 | Highly Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
F/G | 0.9989 | likely_pathogenic | 0.9983 | pathogenic | -3.593 | Highly Destabilizing | 0.993 | D | 0.794 | deleterious | None | None | None | None | N |
F/H | 0.9911 | likely_pathogenic | 0.9875 | pathogenic | -2.374 | Highly Destabilizing | 0.986 | D | 0.693 | prob.neutral | None | None | None | None | N |
F/I | 0.9801 | likely_pathogenic | 0.9821 | pathogenic | -1.572 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | N | 0.486425301 | None | None | N |
F/K | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.498 | Highly Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
F/L | 0.9967 | likely_pathogenic | 0.9969 | pathogenic | -1.572 | Destabilizing | 0.885 | D | 0.711 | prob.delet. | N | 0.487034412 | None | None | N |
F/M | 0.9892 | likely_pathogenic | 0.9876 | pathogenic | -1.235 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/N | 0.9985 | likely_pathogenic | 0.9977 | pathogenic | -3.164 | Highly Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -2.108 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
F/Q | 0.9996 | likely_pathogenic | 0.9992 | pathogenic | -3.026 | Highly Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
F/R | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -2.131 | Highly Destabilizing | 0.993 | D | 0.823 | deleterious | None | None | None | None | N |
F/S | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -3.664 | Highly Destabilizing | 0.991 | D | 0.775 | deleterious | D | 0.534300193 | None | None | N |
F/T | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -3.302 | Highly Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
F/V | 0.9817 | likely_pathogenic | 0.981 | pathogenic | -2.108 | Highly Destabilizing | 0.939 | D | 0.684 | prob.neutral | N | 0.470279148 | None | None | N |
F/W | 0.9136 | likely_pathogenic | 0.9107 | pathogenic | -0.691 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/Y | 0.343 | ambiguous | 0.3895 | ambiguous | -1.161 | Destabilizing | 0.046 | N | 0.251 | neutral | N | 0.484480426 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.