Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18966 | 57121;57122;57123 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
N2AB | 17325 | 52198;52199;52200 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
N2A | 16398 | 49417;49418;49419 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
N2B | 9901 | 29926;29927;29928 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
Novex-1 | 10026 | 30301;30302;30303 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
Novex-2 | 10093 | 30502;30503;30504 | chr2:178598814;178598813;178598812 | chr2:179463541;179463540;179463539 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs749403840 | -0.761 | 0.677 | N | 0.357 | 0.158 | 0.630611982783 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/M | rs749403840 | -0.761 | 0.677 | N | 0.357 | 0.158 | 0.630611982783 | gnomAD-4.0.0 | 1.59215E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7977 | likely_pathogenic | 0.7831 | pathogenic | -2.384 | Highly Destabilizing | 0.293 | N | 0.247 | neutral | None | None | None | None | I |
I/C | 0.884 | likely_pathogenic | 0.8755 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | I |
I/D | 0.9899 | likely_pathogenic | 0.9871 | pathogenic | -2.505 | Highly Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | I |
I/E | 0.8519 | likely_pathogenic | 0.8378 | pathogenic | -2.324 | Highly Destabilizing | 0.995 | D | 0.61 | neutral | None | None | None | None | I |
I/F | 0.6138 | likely_pathogenic | 0.5116 | ambiguous | -1.484 | Destabilizing | 0.994 | D | 0.492 | neutral | N | 0.484926376 | None | None | I |
I/G | 0.9757 | likely_pathogenic | 0.9681 | pathogenic | -2.882 | Highly Destabilizing | 0.969 | D | 0.595 | neutral | None | None | None | None | I |
I/H | 0.9577 | likely_pathogenic | 0.9406 | pathogenic | -2.289 | Highly Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
I/K | 0.8729 | likely_pathogenic | 0.8435 | pathogenic | -1.662 | Destabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | I |
I/L | 0.2492 | likely_benign | 0.2292 | benign | -0.971 | Destabilizing | 0.677 | D | 0.334 | neutral | N | 0.464164314 | None | None | I |
I/M | 0.1646 | likely_benign | 0.1497 | benign | -0.97 | Destabilizing | 0.677 | D | 0.357 | neutral | N | 0.498106317 | None | None | I |
I/N | 0.9184 | likely_pathogenic | 0.9062 | pathogenic | -1.891 | Destabilizing | 0.998 | D | 0.641 | neutral | N | 0.470332054 | None | None | I |
I/P | 0.997 | likely_pathogenic | 0.9961 | pathogenic | -1.421 | Destabilizing | 0.995 | D | 0.617 | neutral | None | None | None | None | I |
I/Q | 0.8022 | likely_pathogenic | 0.7672 | pathogenic | -1.831 | Destabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | I |
I/R | 0.8639 | likely_pathogenic | 0.8262 | pathogenic | -1.33 | Destabilizing | 0.995 | D | 0.619 | neutral | None | None | None | None | I |
I/S | 0.873 | likely_pathogenic | 0.8518 | pathogenic | -2.599 | Highly Destabilizing | 0.921 | D | 0.514 | neutral | N | 0.494796652 | None | None | I |
I/T | 0.7367 | likely_pathogenic | 0.736 | pathogenic | -2.28 | Highly Destabilizing | 0.959 | D | 0.465 | neutral | N | 0.483040864 | None | None | I |
I/V | 0.0941 | likely_benign | 0.0908 | benign | -1.421 | Destabilizing | 0.116 | N | 0.141 | neutral | N | 0.392605286 | None | None | I |
I/W | 0.9725 | likely_pathogenic | 0.956 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
I/Y | 0.9313 | likely_pathogenic | 0.8934 | pathogenic | -1.532 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.