Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1897 | 5914;5915;5916 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
N2AB | 1897 | 5914;5915;5916 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
N2A | 1897 | 5914;5915;5916 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
N2B | 1851 | 5776;5777;5778 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
Novex-1 | 1851 | 5776;5777;5778 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
Novex-2 | 1851 | 5776;5777;5778 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
Novex-3 | 1897 | 5914;5915;5916 | chr2:178776175;178776174;178776173 | chr2:179640902;179640901;179640900 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs1299766514 | -2.207 | 1.0 | D | 0.902 | 0.69 | 0.896200649061 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/Q | rs1299766514 | -2.207 | 1.0 | D | 0.902 | 0.69 | 0.896200649061 | gnomAD-4.0.0 | 1.5905E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.959 | likely_pathogenic | 0.9633 | pathogenic | -2.708 | Highly Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
L/C | 0.903 | likely_pathogenic | 0.9166 | pathogenic | -1.776 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.367 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/E | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -3.037 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/F | 0.5 | ambiguous | 0.5089 | ambiguous | -1.694 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/G | 0.9953 | likely_pathogenic | 0.9956 | pathogenic | -3.327 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.9961 | likely_pathogenic | 0.9962 | pathogenic | -3.063 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/I | 0.3476 | ambiguous | 0.3607 | ambiguous | -0.843 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
L/K | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.3149 | likely_benign | 0.3209 | benign | -0.908 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.643615413 | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.999 | pathogenic | -2.792 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.717090994 | None | None | N |
L/Q | 0.9938 | likely_pathogenic | 0.994 | pathogenic | -2.422 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.774256312 | None | None | N |
L/R | 0.9953 | likely_pathogenic | 0.9951 | pathogenic | -2.152 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.717090994 | None | None | N |
L/S | 0.9972 | likely_pathogenic | 0.9974 | pathogenic | -3.355 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/T | 0.9776 | likely_pathogenic | 0.9796 | pathogenic | -2.855 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/V | 0.3829 | ambiguous | 0.4103 | ambiguous | -1.456 | Destabilizing | 0.999 | D | 0.637 | neutral | D | 0.653455833 | None | None | N |
L/W | 0.9788 | likely_pathogenic | 0.9797 | pathogenic | -2.122 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/Y | 0.9841 | likely_pathogenic | 0.9843 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.