Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18974 | 57145;57146;57147 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
N2AB | 17333 | 52222;52223;52224 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
N2A | 16406 | 49441;49442;49443 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
N2B | 9909 | 29950;29951;29952 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
Novex-1 | 10034 | 30325;30326;30327 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
Novex-2 | 10101 | 30526;30527;30528 | chr2:178598790;178598789;178598788 | chr2:179463517;179463516;179463515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1336627311 | -0.322 | 0.946 | N | 0.444 | 0.346 | 0.257292322809 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/V | rs1336627311 | -0.322 | 0.946 | N | 0.444 | 0.346 | 0.257292322809 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4075 | ambiguous | 0.4392 | ambiguous | -0.757 | Destabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | I |
A/D | 0.8504 | likely_pathogenic | 0.821 | pathogenic | -1.08 | Destabilizing | 0.988 | D | 0.625 | neutral | None | None | None | None | I |
A/E | 0.7001 | likely_pathogenic | 0.6578 | pathogenic | -1.113 | Destabilizing | 0.896 | D | 0.553 | neutral | N | 0.466991189 | None | None | I |
A/F | 0.6249 | likely_pathogenic | 0.5836 | pathogenic | -0.983 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/G | 0.2983 | likely_benign | 0.277 | benign | -1.181 | Destabilizing | 0.896 | D | 0.483 | neutral | N | 0.496967379 | None | None | I |
A/H | 0.7982 | likely_pathogenic | 0.7583 | pathogenic | -1.274 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/I | 0.4901 | ambiguous | 0.4375 | ambiguous | -0.421 | Destabilizing | 0.988 | D | 0.618 | neutral | None | None | None | None | I |
A/K | 0.897 | likely_pathogenic | 0.8701 | pathogenic | -1.161 | Destabilizing | 0.919 | D | 0.551 | neutral | None | None | None | None | I |
A/L | 0.4368 | ambiguous | 0.3585 | ambiguous | -0.421 | Destabilizing | 0.919 | D | 0.541 | neutral | None | None | None | None | I |
A/M | 0.4572 | ambiguous | 0.4387 | ambiguous | -0.32 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
A/N | 0.6949 | likely_pathogenic | 0.6577 | pathogenic | -0.851 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | None | None | None | None | I |
A/P | 0.0831 | likely_benign | 0.075 | benign | -0.552 | Destabilizing | 0.004 | N | 0.361 | neutral | N | 0.289595562 | None | None | I |
A/Q | 0.6621 | likely_pathogenic | 0.6038 | pathogenic | -1.025 | Destabilizing | 0.988 | D | 0.617 | neutral | None | None | None | None | I |
A/R | 0.8564 | likely_pathogenic | 0.8168 | pathogenic | -0.779 | Destabilizing | 0.988 | D | 0.613 | neutral | None | None | None | None | I |
A/S | 0.1597 | likely_benign | 0.1561 | benign | -1.202 | Destabilizing | 0.896 | D | 0.507 | neutral | N | 0.440073946 | None | None | I |
A/T | 0.2902 | likely_benign | 0.2428 | benign | -1.149 | Destabilizing | 0.896 | D | 0.447 | neutral | N | 0.462950806 | None | None | I |
A/V | 0.2533 | likely_benign | 0.2415 | benign | -0.552 | Destabilizing | 0.946 | D | 0.444 | neutral | N | 0.447885353 | None | None | I |
A/W | 0.9385 | likely_pathogenic | 0.9077 | pathogenic | -1.307 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
A/Y | 0.7643 | likely_pathogenic | 0.7152 | pathogenic | -0.923 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.