Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19003 | 57232;57233;57234 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
N2AB | 17362 | 52309;52310;52311 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
N2A | 16435 | 49528;49529;49530 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
N2B | 9938 | 30037;30038;30039 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
Novex-1 | 10063 | 30412;30413;30414 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
Novex-2 | 10130 | 30613;30614;30615 | chr2:178598610;178598609;178598608 | chr2:179463337;179463336;179463335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs2052418644 | None | 0.543 | N | 0.186 | 0.165 | 0.226586394389 | gnomAD-4.0.0 | 1.6053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79158E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1263 | likely_benign | 0.1297 | benign | -0.597 | Destabilizing | 0.543 | D | 0.186 | neutral | N | 0.47153705 | None | None | N |
S/C | 0.1381 | likely_benign | 0.1331 | benign | -0.418 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
S/D | 0.3845 | ambiguous | 0.4364 | ambiguous | -0.815 | Destabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
S/E | 0.5194 | ambiguous | 0.5443 | ambiguous | -0.859 | Destabilizing | 0.996 | D | 0.537 | neutral | None | None | None | None | N |
S/F | 0.207 | likely_benign | 0.2191 | benign | -1.069 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/G | 0.1427 | likely_benign | 0.1451 | benign | -0.781 | Destabilizing | 0.992 | D | 0.42 | neutral | None | None | None | None | N |
S/H | 0.3042 | likely_benign | 0.3167 | benign | -1.38 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
S/I | 0.3058 | likely_benign | 0.3115 | benign | -0.223 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/K | 0.6484 | likely_pathogenic | 0.6452 | pathogenic | -0.712 | Destabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
S/L | 0.1462 | likely_benign | 0.1453 | benign | -0.223 | Destabilizing | 0.989 | D | 0.585 | neutral | N | 0.506277529 | None | None | N |
S/M | 0.2023 | likely_benign | 0.209 | benign | 0.311 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
S/N | 0.1369 | likely_benign | 0.144 | benign | -0.671 | Destabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | N |
S/P | 0.9529 | likely_pathogenic | 0.9512 | pathogenic | -0.317 | Destabilizing | 0.998 | D | 0.639 | neutral | N | 0.506531019 | None | None | N |
S/Q | 0.4776 | ambiguous | 0.4844 | ambiguous | -0.984 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
S/R | 0.6342 | likely_pathogenic | 0.6233 | pathogenic | -0.459 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
S/T | 0.0655 | likely_benign | 0.0706 | benign | -0.648 | Destabilizing | 0.989 | D | 0.419 | neutral | N | 0.426798005 | None | None | N |
S/V | 0.2912 | likely_benign | 0.2988 | benign | -0.317 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
S/W | 0.4186 | ambiguous | 0.4351 | ambiguous | -1.06 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/Y | 0.1849 | likely_benign | 0.1839 | benign | -0.771 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.