Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19005 | 57238;57239;57240 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
N2AB | 17364 | 52315;52316;52317 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
N2A | 16437 | 49534;49535;49536 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
N2B | 9940 | 30043;30044;30045 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
Novex-1 | 10065 | 30418;30419;30420 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
Novex-2 | 10132 | 30619;30620;30621 | chr2:178598604;178598603;178598602 | chr2:179463331;179463330;179463329 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | None | N | 0.247 | 0.089 | 0.0551355673512 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4514 | ambiguous | 0.4675 | ambiguous | -1.571 | Destabilizing | 0.824 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/D | 0.9908 | likely_pathogenic | 0.9902 | pathogenic | -2.207 | Highly Destabilizing | 0.555 | D | 0.79 | deleterious | None | None | None | None | N |
A/E | 0.9773 | likely_pathogenic | 0.975 | pathogenic | -1.974 | Destabilizing | 0.211 | N | 0.783 | deleterious | N | 0.474696466 | None | None | N |
A/F | 0.8601 | likely_pathogenic | 0.8635 | pathogenic | -0.729 | Destabilizing | 0.38 | N | 0.796 | deleterious | None | None | None | None | N |
A/G | 0.4634 | ambiguous | 0.4392 | ambiguous | -1.594 | Destabilizing | 0.211 | N | 0.616 | neutral | N | 0.468113101 | None | None | N |
A/H | 0.9892 | likely_pathogenic | 0.9885 | pathogenic | -2.081 | Highly Destabilizing | 0.935 | D | 0.763 | deleterious | None | None | None | None | N |
A/I | 0.1489 | likely_benign | 0.165 | benign | 0.369 | Stabilizing | 0.012 | N | 0.609 | neutral | None | None | None | None | N |
A/K | 0.9907 | likely_pathogenic | 0.988 | pathogenic | -1.163 | Destabilizing | 0.262 | N | 0.793 | deleterious | None | None | None | None | N |
A/L | 0.3207 | likely_benign | 0.3247 | benign | 0.369 | Stabilizing | 0.035 | N | 0.587 | neutral | None | None | None | None | N |
A/M | 0.4275 | ambiguous | 0.4465 | ambiguous | -0.16 | Destabilizing | 0.38 | N | 0.781 | deleterious | None | None | None | None | N |
A/N | 0.9619 | likely_pathogenic | 0.9619 | pathogenic | -1.579 | Destabilizing | 0.791 | D | 0.797 | deleterious | None | None | None | None | N |
A/P | 0.9776 | likely_pathogenic | 0.9775 | pathogenic | -0.064 | Destabilizing | 0.484 | N | 0.813 | deleterious | N | 0.486052772 | None | None | N |
A/Q | 0.9639 | likely_pathogenic | 0.9607 | pathogenic | -1.309 | Destabilizing | 0.791 | D | 0.811 | deleterious | None | None | None | None | N |
A/R | 0.9749 | likely_pathogenic | 0.9693 | pathogenic | -1.397 | Destabilizing | 0.555 | D | 0.813 | deleterious | None | None | None | None | N |
A/S | 0.341 | ambiguous | 0.3515 | ambiguous | -2.071 | Highly Destabilizing | 0.117 | N | 0.621 | neutral | N | 0.51622793 | None | None | N |
A/T | 0.1698 | likely_benign | 0.1838 | benign | -1.68 | Destabilizing | 0.062 | N | 0.599 | neutral | N | 0.474189487 | None | None | N |
A/V | 0.054 | likely_benign | 0.0608 | benign | -0.064 | Destabilizing | None | N | 0.247 | neutral | N | 0.356604414 | None | None | N |
A/W | 0.993 | likely_pathogenic | 0.9924 | pathogenic | -1.473 | Destabilizing | 0.935 | D | 0.783 | deleterious | None | None | None | None | N |
A/Y | 0.9737 | likely_pathogenic | 0.9718 | pathogenic | -0.887 | Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.