Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19008 | 57247;57248;57249 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
N2AB | 17367 | 52324;52325;52326 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
N2A | 16440 | 49543;49544;49545 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
N2B | 9943 | 30052;30053;30054 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
Novex-1 | 10068 | 30427;30428;30429 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
Novex-2 | 10135 | 30628;30629;30630 | chr2:178598595;178598594;178598593 | chr2:179463322;179463321;179463320 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.603 | 0.37 | 0.37262878642 | gnomAD-4.0.0 | 1.60466E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2028 | likely_benign | 0.191 | benign | -1.103 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.435711063 | None | None | N |
E/C | 0.8536 | likely_pathogenic | 0.8246 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/D | 0.4294 | ambiguous | 0.3945 | ambiguous | -1.264 | Destabilizing | 0.999 | D | 0.518 | neutral | N | 0.504648287 | None | None | N |
E/F | 0.8618 | likely_pathogenic | 0.8314 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
E/G | 0.3704 | ambiguous | 0.3572 | ambiguous | -1.496 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.476096248 | None | None | N |
E/H | 0.767 | likely_pathogenic | 0.7169 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/I | 0.4298 | ambiguous | 0.3964 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
E/K | 0.5129 | ambiguous | 0.4812 | ambiguous | -0.98 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.444618548 | None | None | N |
E/L | 0.563 | ambiguous | 0.5249 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
E/M | 0.5531 | ambiguous | 0.52 | ambiguous | 0.536 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
E/N | 0.6075 | likely_pathogenic | 0.5751 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/P | 0.9948 | likely_pathogenic | 0.9928 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
E/Q | 0.2028 | likely_benign | 0.1894 | benign | -1.226 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.452525956 | None | None | N |
E/R | 0.6454 | likely_pathogenic | 0.5972 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/S | 0.2943 | likely_benign | 0.273 | benign | -1.807 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/T | 0.2872 | likely_benign | 0.2572 | benign | -1.477 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/V | 0.2709 | likely_benign | 0.2499 | benign | -0.355 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.474461453 | None | None | N |
E/W | 0.9708 | likely_pathogenic | 0.9597 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/Y | 0.8386 | likely_pathogenic | 0.8005 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.