Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19010 | 57253;57254;57255 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
N2AB | 17369 | 52330;52331;52332 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
N2A | 16442 | 49549;49550;49551 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
N2B | 9945 | 30058;30059;30060 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
Novex-1 | 10070 | 30433;30434;30435 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
Novex-2 | 10137 | 30634;30635;30636 | chr2:178598589;178598588;178598587 | chr2:179463316;179463315;179463314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs758709446 | -0.248 | 0.005 | N | 0.188 | 0.051 | 0.141422826196 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.74E-05 | None | 0 | None | 0 | 0 | 0 |
S/A | rs758709446 | -0.248 | 0.005 | N | 0.188 | 0.051 | 0.141422826196 | gnomAD-4.0.0 | 1.60333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7908E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0815 | likely_benign | 0.0778 | benign | -0.329 | Destabilizing | 0.005 | N | 0.188 | neutral | N | 0.461878945 | None | None | N |
S/C | 0.1024 | likely_benign | 0.0923 | benign | -0.232 | Destabilizing | 0.295 | N | 0.437 | neutral | N | 0.500898693 | None | None | N |
S/D | 0.4164 | ambiguous | 0.4068 | ambiguous | -0.399 | Destabilizing | 0.072 | N | 0.252 | neutral | None | None | None | None | N |
S/E | 0.4232 | ambiguous | 0.4014 | ambiguous | -0.289 | Destabilizing | 0.072 | N | 0.266 | neutral | None | None | None | None | N |
S/F | 0.148 | likely_benign | 0.145 | benign | -0.319 | Destabilizing | 0.055 | N | 0.533 | neutral | N | 0.514462636 | None | None | N |
S/G | 0.0981 | likely_benign | 0.0953 | benign | -0.665 | Destabilizing | 0.031 | N | 0.251 | neutral | None | None | None | None | N |
S/H | 0.278 | likely_benign | 0.2655 | benign | -1.091 | Destabilizing | 0.628 | D | 0.44 | neutral | None | None | None | None | N |
S/I | 0.0783 | likely_benign | 0.0869 | benign | 0.482 | Stabilizing | None | N | 0.245 | neutral | None | None | None | None | N |
S/K | 0.5159 | ambiguous | 0.492 | ambiguous | -0.313 | Destabilizing | 0.072 | N | 0.26 | neutral | None | None | None | None | N |
S/L | 0.0663 | likely_benign | 0.0672 | benign | 0.482 | Stabilizing | 0.003 | N | 0.325 | neutral | None | None | None | None | N |
S/M | 0.1066 | likely_benign | 0.1119 | benign | 0.308 | Stabilizing | 0.003 | N | 0.262 | neutral | None | None | None | None | N |
S/N | 0.1006 | likely_benign | 0.1054 | benign | -0.652 | Destabilizing | 0.072 | N | 0.284 | neutral | None | None | None | None | N |
S/P | 0.6166 | likely_pathogenic | 0.6083 | pathogenic | 0.248 | Stabilizing | 0.106 | N | 0.511 | neutral | N | 0.510248894 | None | None | N |
S/Q | 0.3434 | ambiguous | 0.3373 | benign | -0.502 | Destabilizing | 0.136 | N | 0.399 | neutral | None | None | None | None | N |
S/R | 0.4994 | ambiguous | 0.4686 | ambiguous | -0.518 | Destabilizing | 0.072 | N | 0.502 | neutral | None | None | None | None | N |
S/T | 0.0615 | likely_benign | 0.0653 | benign | -0.45 | Destabilizing | None | N | 0.064 | neutral | N | 0.436903142 | None | None | N |
S/V | 0.1051 | likely_benign | 0.1108 | benign | 0.248 | Stabilizing | None | N | 0.261 | neutral | None | None | None | None | N |
S/W | 0.3468 | ambiguous | 0.3343 | benign | -0.566 | Destabilizing | 0.864 | D | 0.488 | neutral | None | None | None | None | N |
S/Y | 0.1601 | likely_benign | 0.1465 | benign | -0.129 | Destabilizing | 0.295 | N | 0.59 | neutral | N | 0.500725334 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.