Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19020 | 57283;57284;57285 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
N2AB | 17379 | 52360;52361;52362 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
N2A | 16452 | 49579;49580;49581 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
N2B | 9955 | 30088;30089;30090 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
Novex-1 | 10080 | 30463;30464;30465 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
Novex-2 | 10147 | 30664;30665;30666 | chr2:178598559;178598558;178598557 | chr2:179463286;179463285;179463284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.218 | 0.158 | 0.220303561663 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8955 | likely_pathogenic | 0.8916 | pathogenic | -1.871 | Destabilizing | 0.104 | N | 0.638 | neutral | N | 0.473334249 | None | None | I |
V/C | 0.9579 | likely_pathogenic | 0.9579 | pathogenic | -1.301 | Destabilizing | 0.968 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/D | 0.9855 | likely_pathogenic | 0.9839 | pathogenic | -1.973 | Destabilizing | 0.726 | D | 0.851 | deleterious | None | None | None | None | I |
V/E | 0.9654 | likely_pathogenic | 0.9597 | pathogenic | -1.921 | Destabilizing | 0.667 | D | 0.829 | deleterious | N | 0.508835197 | None | None | I |
V/F | 0.8168 | likely_pathogenic | 0.7988 | pathogenic | -1.423 | Destabilizing | 0.567 | D | 0.779 | deleterious | None | None | None | None | I |
V/G | 0.9266 | likely_pathogenic | 0.9187 | pathogenic | -2.256 | Highly Destabilizing | 0.667 | D | 0.843 | deleterious | N | 0.508581707 | None | None | I |
V/H | 0.9909 | likely_pathogenic | 0.9906 | pathogenic | -1.824 | Destabilizing | 0.968 | D | 0.827 | deleterious | None | None | None | None | I |
V/I | 0.0568 | likely_benign | 0.0559 | benign | -0.876 | Destabilizing | None | N | 0.218 | neutral | N | 0.370173931 | None | None | I |
V/K | 0.9736 | likely_pathogenic | 0.9682 | pathogenic | -1.555 | Destabilizing | 0.726 | D | 0.831 | deleterious | None | None | None | None | I |
V/L | 0.4186 | ambiguous | 0.392 | ambiguous | -0.876 | Destabilizing | 0.009 | N | 0.428 | neutral | N | 0.47236251 | None | None | I |
V/M | 0.5632 | ambiguous | 0.5618 | ambiguous | -0.624 | Destabilizing | 0.567 | D | 0.654 | neutral | None | None | None | None | I |
V/N | 0.9428 | likely_pathogenic | 0.9408 | pathogenic | -1.452 | Destabilizing | 0.89 | D | 0.85 | deleterious | None | None | None | None | I |
V/P | 0.8491 | likely_pathogenic | 0.8587 | pathogenic | -1.175 | Destabilizing | 0.89 | D | 0.825 | deleterious | None | None | None | None | I |
V/Q | 0.9733 | likely_pathogenic | 0.9714 | pathogenic | -1.573 | Destabilizing | 0.89 | D | 0.821 | deleterious | None | None | None | None | I |
V/R | 0.9679 | likely_pathogenic | 0.9595 | pathogenic | -1.04 | Destabilizing | 0.726 | D | 0.853 | deleterious | None | None | None | None | I |
V/S | 0.9495 | likely_pathogenic | 0.9447 | pathogenic | -2.016 | Highly Destabilizing | 0.726 | D | 0.811 | deleterious | None | None | None | None | I |
V/T | 0.8833 | likely_pathogenic | 0.8826 | pathogenic | -1.847 | Destabilizing | 0.272 | N | 0.714 | prob.delet. | None | None | None | None | I |
V/W | 0.9923 | likely_pathogenic | 0.9921 | pathogenic | -1.7 | Destabilizing | 0.968 | D | 0.793 | deleterious | None | None | None | None | I |
V/Y | 0.9698 | likely_pathogenic | 0.9658 | pathogenic | -1.405 | Destabilizing | 0.726 | D | 0.758 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.