Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19024 | 57295;57296;57297 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
N2AB | 17383 | 52372;52373;52374 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
N2A | 16456 | 49591;49592;49593 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
N2B | 9959 | 30100;30101;30102 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
Novex-1 | 10084 | 30475;30476;30477 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
Novex-2 | 10151 | 30676;30677;30678 | chr2:178598547;178598546;178598545 | chr2:179463274;179463273;179463272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs876658068 | None | 0.022 | N | 0.324 | 0.087 | 0.430126000877 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 2.41E-05 | 1.31062E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs876658068 | None | 0.022 | N | 0.324 | 0.087 | 0.430126000877 | gnomAD-4.0.0 | 6.09015E-06 | None | None | None | None | N | None | 1.74758E-05 | 1.23122E-04 | None | 0 | 0 | None | 0 | 0 | 1.20497E-06 | 9.39496E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3419 | ambiguous | 0.3448 | ambiguous | -2.66 | Highly Destabilizing | 0.688 | D | 0.633 | neutral | None | None | None | None | N |
I/C | 0.6047 | likely_pathogenic | 0.6232 | pathogenic | -1.948 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/D | 0.7844 | likely_pathogenic | 0.785 | pathogenic | -2.962 | Highly Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/E | 0.6043 | likely_pathogenic | 0.5781 | pathogenic | -2.798 | Highly Destabilizing | 0.991 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/F | 0.1007 | likely_benign | 0.1073 | benign | -1.564 | Destabilizing | 0.005 | N | 0.404 | neutral | N | 0.461876158 | None | None | N |
I/G | 0.7957 | likely_pathogenic | 0.7895 | pathogenic | -3.145 | Highly Destabilizing | 0.974 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/H | 0.4219 | ambiguous | 0.4351 | ambiguous | -2.454 | Highly Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/K | 0.5044 | ambiguous | 0.4792 | ambiguous | -2.159 | Highly Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/L | 0.1141 | likely_benign | 0.1027 | benign | -1.278 | Destabilizing | 0.267 | N | 0.531 | neutral | N | 0.472322438 | None | None | N |
I/M | 0.0979 | likely_benign | 0.097 | benign | -1.205 | Destabilizing | 0.986 | D | 0.711 | prob.delet. | N | 0.467747934 | None | None | N |
I/N | 0.4107 | ambiguous | 0.4171 | ambiguous | -2.324 | Highly Destabilizing | 0.989 | D | 0.712 | prob.delet. | N | 0.499719683 | None | None | N |
I/P | 0.9821 | likely_pathogenic | 0.9837 | pathogenic | -1.718 | Destabilizing | 0.991 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/Q | 0.4947 | ambiguous | 0.4753 | ambiguous | -2.304 | Highly Destabilizing | 0.991 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/R | 0.364 | ambiguous | 0.3456 | ambiguous | -1.666 | Destabilizing | 0.991 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/S | 0.3387 | likely_benign | 0.3378 | benign | -2.98 | Highly Destabilizing | 0.891 | D | 0.664 | neutral | N | 0.499660968 | None | None | N |
I/T | 0.1462 | likely_benign | 0.1465 | benign | -2.691 | Highly Destabilizing | 0.801 | D | 0.654 | neutral | N | 0.480864563 | None | None | N |
I/V | 0.0699 | likely_benign | 0.0718 | benign | -1.718 | Destabilizing | 0.022 | N | 0.324 | neutral | N | 0.421490972 | None | None | N |
I/W | 0.5597 | ambiguous | 0.5793 | pathogenic | -1.891 | Destabilizing | 0.998 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/Y | 0.3596 | ambiguous | 0.3577 | ambiguous | -1.678 | Destabilizing | 0.728 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.