Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19026 | 57301;57302;57303 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
N2AB | 17385 | 52378;52379;52380 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
N2A | 16458 | 49597;49598;49599 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
N2B | 9961 | 30106;30107;30108 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
Novex-1 | 10086 | 30481;30482;30483 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
Novex-2 | 10153 | 30682;30683;30684 | chr2:178598541;178598540;178598539 | chr2:179463268;179463267;179463266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.654 | 0.21 | 0.30212335484 | gnomAD-4.0.0 | 1.60275E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86666E-06 | 0 | 0 |
E/Q | rs794727393 | None | 1.0 | D | 0.762 | 0.294 | 0.282179105231 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
E/Q | rs794727393 | None | 1.0 | D | 0.762 | 0.294 | 0.282179105231 | gnomAD-4.0.0 | 4.35069E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 7.81355E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8563 | likely_pathogenic | 0.8596 | pathogenic | -1.533 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.527949729 | None | None | N |
E/C | 0.9685 | likely_pathogenic | 0.9721 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.8361 | likely_pathogenic | 0.8552 | pathogenic | -1.729 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.47734672 | None | None | N |
E/F | 0.9748 | likely_pathogenic | 0.982 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/G | 0.9164 | likely_pathogenic | 0.9165 | pathogenic | -1.917 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.529724155 | None | None | N |
E/H | 0.9623 | likely_pathogenic | 0.9678 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/I | 0.9543 | likely_pathogenic | 0.9583 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.9495 | likely_pathogenic | 0.9543 | pathogenic | -1.593 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.51154054 | None | None | N |
E/L | 0.9589 | likely_pathogenic | 0.962 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/M | 0.9433 | likely_pathogenic | 0.9525 | pathogenic | 0.308 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/N | 0.9738 | likely_pathogenic | 0.9793 | pathogenic | -1.796 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/P | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/Q | 0.6671 | likely_pathogenic | 0.6775 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.762 | deleterious | D | 0.523810051 | None | None | N |
E/R | 0.9498 | likely_pathogenic | 0.9493 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/S | 0.8939 | likely_pathogenic | 0.9013 | pathogenic | -2.415 | Highly Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/T | 0.9452 | likely_pathogenic | 0.9474 | pathogenic | -2.055 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/V | 0.9063 | likely_pathogenic | 0.9135 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.528710197 | None | None | N |
E/W | 0.9864 | likely_pathogenic | 0.989 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.9488 | likely_pathogenic | 0.9629 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.