Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19027 | 57304;57305;57306 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
N2AB | 17386 | 52381;52382;52383 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
N2A | 16459 | 49600;49601;49602 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
N2B | 9962 | 30109;30110;30111 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
Novex-1 | 10087 | 30484;30485;30486 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
Novex-2 | 10154 | 30685;30686;30687 | chr2:178598538;178598537;178598536 | chr2:179463265;179463264;179463263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1275283475 | -0.986 | 0.999 | N | 0.761 | 0.393 | 0.489036454283 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.43E-05 | None | 0 | 0 | 0 |
Y/C | rs1275283475 | -0.986 | 0.999 | N | 0.761 | 0.393 | 0.489036454283 | gnomAD-4.0.0 | 1.60327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46593E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7019 | likely_pathogenic | 0.7352 | pathogenic | -2.335 | Highly Destabilizing | 0.976 | D | 0.71 | prob.delet. | None | None | None | None | N |
Y/C | 0.1414 | likely_benign | 0.1581 | benign | -1.032 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.478466491 | None | None | N |
Y/D | 0.8776 | likely_pathogenic | 0.881 | pathogenic | -3.146 | Highly Destabilizing | 0.997 | D | 0.8 | deleterious | N | 0.513602272 | None | None | N |
Y/E | 0.8974 | likely_pathogenic | 0.9107 | pathogenic | -2.921 | Highly Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
Y/F | 0.0596 | likely_benign | 0.0791 | benign | -0.811 | Destabilizing | 0.046 | N | 0.313 | neutral | N | 0.490473842 | None | None | N |
Y/G | 0.7589 | likely_pathogenic | 0.743 | pathogenic | -2.747 | Highly Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
Y/H | 0.3001 | likely_benign | 0.301 | benign | -1.819 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | D | 0.524106413 | None | None | N |
Y/I | 0.4424 | ambiguous | 0.5285 | ambiguous | -0.969 | Destabilizing | 0.973 | D | 0.703 | prob.neutral | None | None | None | None | N |
Y/K | 0.7217 | likely_pathogenic | 0.7314 | pathogenic | -1.827 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
Y/L | 0.5603 | ambiguous | 0.5897 | pathogenic | -0.969 | Destabilizing | 0.91 | D | 0.665 | neutral | None | None | None | None | N |
Y/M | 0.5274 | ambiguous | 0.5712 | pathogenic | -0.695 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
Y/N | 0.5946 | likely_pathogenic | 0.5652 | pathogenic | -2.757 | Highly Destabilizing | 0.997 | D | 0.767 | deleterious | N | 0.502245967 | None | None | N |
Y/P | 0.9951 | likely_pathogenic | 0.9957 | pathogenic | -1.439 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
Y/Q | 0.6901 | likely_pathogenic | 0.7017 | pathogenic | -2.398 | Highly Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
Y/R | 0.605 | likely_pathogenic | 0.6265 | pathogenic | -1.942 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
Y/S | 0.5609 | ambiguous | 0.5639 | ambiguous | -2.964 | Highly Destabilizing | 0.991 | D | 0.739 | prob.delet. | N | 0.488743046 | None | None | N |
Y/T | 0.7211 | likely_pathogenic | 0.7435 | pathogenic | -2.609 | Highly Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
Y/V | 0.3709 | ambiguous | 0.4405 | ambiguous | -1.439 | Destabilizing | 0.953 | D | 0.693 | prob.neutral | None | None | None | None | N |
Y/W | 0.3316 | likely_benign | 0.368 | ambiguous | -0.224 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.