Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19028 | 57307;57308;57309 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
N2AB | 17387 | 52384;52385;52386 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
N2A | 16460 | 49603;49604;49605 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
N2B | 9963 | 30112;30113;30114 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
Novex-1 | 10088 | 30487;30488;30489 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
Novex-2 | 10155 | 30688;30689;30690 | chr2:178598535;178598534;178598533 | chr2:179463262;179463261;179463260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs765612779 | -1.94 | 0.999 | N | 0.73 | 0.476 | 0.359763055319 | gnomAD-2.1.1 | 8.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
K/T | rs765612779 | -1.94 | 0.999 | N | 0.73 | 0.476 | 0.359763055319 | gnomAD-4.0.0 | 3.20645E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73414E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5186 | ambiguous | 0.5777 | pathogenic | -1.884 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
K/C | 0.4404 | ambiguous | 0.4801 | ambiguous | -1.736 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
K/D | 0.9674 | likely_pathogenic | 0.9769 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/E | 0.3861 | ambiguous | 0.4352 | ambiguous | -1.875 | Destabilizing | 0.996 | D | 0.423 | neutral | N | 0.508091237 | None | None | N |
K/F | 0.8815 | likely_pathogenic | 0.9095 | pathogenic | -0.941 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
K/G | 0.7506 | likely_pathogenic | 0.7929 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/H | 0.5817 | likely_pathogenic | 0.6222 | pathogenic | -2.287 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/I | 0.5614 | ambiguous | 0.6143 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.886 | deleterious | N | 0.474966863 | None | None | N |
K/L | 0.4089 | ambiguous | 0.4486 | ambiguous | -0.688 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/M | 0.2117 | likely_benign | 0.2268 | benign | -1.185 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
K/N | 0.8818 | likely_pathogenic | 0.907 | pathogenic | -2.002 | Highly Destabilizing | 0.999 | D | 0.668 | neutral | N | 0.474966863 | None | None | N |
K/P | 0.9902 | likely_pathogenic | 0.9934 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
K/Q | 0.1053 | likely_benign | 0.1146 | benign | -1.583 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.459451928 | None | None | N |
K/R | 0.0723 | likely_benign | 0.0734 | benign | -1.546 | Destabilizing | 0.64 | D | 0.287 | neutral | N | 0.4010197 | None | None | N |
K/S | 0.7382 | likely_pathogenic | 0.7939 | pathogenic | -2.452 | Highly Destabilizing | 0.998 | D | 0.501 | neutral | None | None | None | None | N |
K/T | 0.4191 | ambiguous | 0.4477 | ambiguous | -1.952 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | N | 0.469940434 | None | None | N |
K/V | 0.4552 | ambiguous | 0.5031 | ambiguous | -1.073 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
K/W | 0.8802 | likely_pathogenic | 0.8997 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
K/Y | 0.8286 | likely_pathogenic | 0.852 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.