Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19029 | 57310;57311;57312 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
N2AB | 17388 | 52387;52388;52389 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
N2A | 16461 | 49606;49607;49608 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
N2B | 9964 | 30115;30116;30117 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
Novex-1 | 10089 | 30490;30491;30492 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
Novex-2 | 10156 | 30691;30692;30693 | chr2:178598532;178598531;178598530 | chr2:179463259;179463258;179463257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.698 | N | 0.438 | 0.244 | 0.251639045875 | gnomAD-4.0.0 | 1.37312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00409E-07 | 1.18223E-05 | 0 |
E/Q | rs761979702 | -0.785 | 0.294 | N | 0.227 | 0.116 | 0.195762928549 | gnomAD-2.1.1 | 1.64E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.29043E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs761979702 | -0.785 | 0.294 | N | 0.227 | 0.116 | 0.195762928549 | gnomAD-4.0.0 | 1.51043E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.5747E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1422 | likely_benign | 0.1515 | benign | -0.622 | Destabilizing | 0.822 | D | 0.521 | neutral | N | 0.521695252 | None | None | N |
E/C | 0.8505 | likely_pathogenic | 0.8595 | pathogenic | -0.379 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/D | 0.3765 | ambiguous | 0.3881 | ambiguous | -0.967 | Destabilizing | 0.014 | N | 0.274 | neutral | N | 0.485697167 | None | None | N |
E/F | 0.8656 | likely_pathogenic | 0.8836 | pathogenic | 0.189 | Stabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
E/G | 0.3149 | likely_benign | 0.2911 | benign | -1.003 | Destabilizing | 0.822 | D | 0.587 | neutral | D | 0.524004839 | None | None | N |
E/H | 0.7478 | likely_pathogenic | 0.7565 | pathogenic | 0.103 | Stabilizing | 0.994 | D | 0.614 | neutral | None | None | None | None | N |
E/I | 0.2774 | likely_benign | 0.3234 | benign | 0.422 | Stabilizing | 0.978 | D | 0.79 | deleterious | None | None | None | None | N |
E/K | 0.2064 | likely_benign | 0.2046 | benign | -0.31 | Destabilizing | 0.698 | D | 0.438 | neutral | N | 0.473613304 | None | None | N |
E/L | 0.2843 | likely_benign | 0.3138 | benign | 0.422 | Stabilizing | 0.956 | D | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.3644 | ambiguous | 0.3861 | ambiguous | 0.687 | Stabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/N | 0.5326 | ambiguous | 0.5433 | ambiguous | -0.97 | Destabilizing | 0.915 | D | 0.575 | neutral | None | None | None | None | N |
E/P | 0.4807 | ambiguous | 0.5065 | ambiguous | 0.096 | Stabilizing | 0.978 | D | 0.75 | deleterious | None | None | None | None | N |
E/Q | 0.1796 | likely_benign | 0.1839 | benign | -0.806 | Destabilizing | 0.294 | N | 0.227 | neutral | N | 0.48384894 | None | None | N |
E/R | 0.3759 | ambiguous | 0.3737 | ambiguous | 0.072 | Stabilizing | 0.956 | D | 0.586 | neutral | None | None | None | None | N |
E/S | 0.4041 | ambiguous | 0.4136 | ambiguous | -1.248 | Destabilizing | 0.86 | D | 0.484 | neutral | None | None | None | None | N |
E/T | 0.3194 | likely_benign | 0.3336 | benign | -0.92 | Destabilizing | 0.956 | D | 0.649 | neutral | None | None | None | None | N |
E/V | 0.1562 | likely_benign | 0.1775 | benign | 0.096 | Stabilizing | 0.971 | D | 0.731 | prob.delet. | N | 0.471118976 | None | None | N |
E/W | 0.9499 | likely_pathogenic | 0.9558 | pathogenic | 0.505 | Stabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/Y | 0.8096 | likely_pathogenic | 0.8249 | pathogenic | 0.478 | Stabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.