Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19037 | 57334;57335;57336 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
N2AB | 17396 | 52411;52412;52413 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
N2A | 16469 | 49630;49631;49632 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
N2B | 9972 | 30139;30140;30141 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
Novex-1 | 10097 | 30514;30515;30516 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
Novex-2 | 10164 | 30715;30716;30717 | chr2:178598508;178598507;178598506 | chr2:179463235;179463234;179463233 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1400944262 | 0.337 | 0.201 | N | 0.556 | 0.118 | 0.305730143919 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1400944262 | 0.337 | 0.201 | N | 0.556 | 0.118 | 0.305730143919 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs1400944262 | 0.337 | 0.201 | N | 0.556 | 0.118 | 0.305730143919 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2618 | likely_benign | 0.2779 | benign | -0.355 | Destabilizing | 0.25 | N | 0.597 | neutral | None | None | None | None | N |
K/C | 0.6029 | likely_pathogenic | 0.612 | pathogenic | -0.394 | Destabilizing | 0.982 | D | 0.745 | deleterious | None | None | None | None | N |
K/D | 0.6674 | likely_pathogenic | 0.6742 | pathogenic | 0.095 | Stabilizing | 0.7 | D | 0.664 | neutral | None | None | None | None | N |
K/E | 0.1947 | likely_benign | 0.1954 | benign | 0.17 | Stabilizing | 0.201 | N | 0.556 | neutral | N | 0.469186132 | None | None | N |
K/F | 0.6094 | likely_pathogenic | 0.6622 | pathogenic | -0.147 | Destabilizing | 0.982 | D | 0.752 | deleterious | None | None | None | None | N |
K/G | 0.473 | ambiguous | 0.4792 | ambiguous | -0.681 | Destabilizing | 0.399 | N | 0.643 | neutral | None | None | None | None | N |
K/H | 0.3278 | likely_benign | 0.3449 | ambiguous | -1.025 | Destabilizing | 0.898 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/I | 0.201 | likely_benign | 0.2198 | benign | 0.464 | Stabilizing | 0.826 | D | 0.76 | deleterious | None | None | None | None | N |
K/L | 0.2226 | likely_benign | 0.2653 | benign | 0.464 | Stabilizing | 0.399 | N | 0.643 | neutral | None | None | None | None | N |
K/M | 0.1579 | likely_benign | 0.1703 | benign | 0.302 | Stabilizing | 0.931 | D | 0.689 | prob.neutral | N | 0.467609803 | None | None | N |
K/N | 0.4394 | ambiguous | 0.4628 | ambiguous | -0.145 | Destabilizing | 0.638 | D | 0.605 | neutral | N | 0.513651772 | None | None | N |
K/P | 0.4071 | ambiguous | 0.4363 | ambiguous | 0.222 | Stabilizing | 0.826 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/Q | 0.1318 | likely_benign | 0.1399 | benign | -0.269 | Destabilizing | 0.004 | N | 0.313 | neutral | N | 0.484849018 | None | None | N |
K/R | 0.0783 | likely_benign | 0.0786 | benign | -0.45 | Destabilizing | 0.002 | N | 0.364 | neutral | N | 0.436903142 | None | None | N |
K/S | 0.4356 | ambiguous | 0.4502 | ambiguous | -0.779 | Destabilizing | 0.25 | N | 0.579 | neutral | None | None | None | None | N |
K/T | 0.1498 | likely_benign | 0.1533 | benign | -0.514 | Destabilizing | 0.638 | D | 0.65 | neutral | N | 0.464012386 | None | None | N |
K/V | 0.2059 | likely_benign | 0.2301 | benign | 0.222 | Stabilizing | 0.7 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.6009 | likely_pathogenic | 0.6234 | pathogenic | -0.03 | Destabilizing | 0.982 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/Y | 0.5209 | ambiguous | 0.5449 | ambiguous | 0.258 | Stabilizing | 0.826 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.