Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19041 | 57346;57347;57348 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
N2AB | 17400 | 52423;52424;52425 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
N2A | 16473 | 49642;49643;49644 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
N2B | 9976 | 30151;30152;30153 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
Novex-1 | 10101 | 30526;30527;30528 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
Novex-2 | 10168 | 30727;30728;30729 | chr2:178598049;178598048;178598047 | chr2:179462776;179462775;179462774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1334101213 | 0.212 | 0.988 | N | 0.376 | 0.218 | 0.244539031024 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs1334101213 | 0.212 | 0.988 | N | 0.376 | 0.218 | 0.244539031024 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1334101213 | 0.212 | 0.988 | N | 0.376 | 0.218 | 0.244539031024 | gnomAD-4.0.0 | 4.96182E-06 | None | None | None | None | N | None | 1.0686E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3036 | likely_benign | 0.3082 | benign | 0.055 | Stabilizing | 0.927 | D | 0.388 | neutral | None | None | None | None | N |
K/C | 0.6953 | likely_pathogenic | 0.67 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.44 | neutral | None | None | None | None | N |
K/D | 0.5409 | ambiguous | 0.5351 | ambiguous | -0.304 | Destabilizing | 0.984 | D | 0.353 | neutral | None | None | None | None | N |
K/E | 0.1976 | likely_benign | 0.1975 | benign | -0.318 | Destabilizing | 0.959 | D | 0.419 | neutral | N | 0.449581651 | None | None | N |
K/F | 0.7765 | likely_pathogenic | 0.7666 | pathogenic | -0.277 | Destabilizing | 0.999 | D | 0.429 | neutral | None | None | None | None | N |
K/G | 0.3936 | ambiguous | 0.3894 | ambiguous | -0.073 | Destabilizing | 0.984 | D | 0.401 | neutral | None | None | None | None | N |
K/H | 0.3581 | ambiguous | 0.3484 | ambiguous | -0.183 | Destabilizing | 0.999 | D | 0.347 | neutral | None | None | None | None | N |
K/I | 0.341 | ambiguous | 0.3323 | benign | 0.31 | Stabilizing | 0.988 | D | 0.44 | neutral | N | 0.479672484 | None | None | N |
K/L | 0.4042 | ambiguous | 0.4029 | ambiguous | 0.31 | Stabilizing | 0.969 | D | 0.408 | neutral | None | None | None | None | N |
K/M | 0.25 | likely_benign | 0.2459 | benign | -0.075 | Destabilizing | 1.0 | D | 0.347 | neutral | None | None | None | None | N |
K/N | 0.4327 | ambiguous | 0.4289 | ambiguous | 0.105 | Stabilizing | 0.979 | D | 0.355 | neutral | N | 0.479173839 | None | None | N |
K/P | 0.7519 | likely_pathogenic | 0.734 | pathogenic | 0.249 | Stabilizing | 0.999 | D | 0.34 | neutral | None | None | None | None | N |
K/Q | 0.1515 | likely_benign | 0.15 | benign | -0.044 | Destabilizing | 0.988 | D | 0.376 | neutral | N | 0.483192792 | None | None | N |
K/R | 0.0827 | likely_benign | 0.084 | benign | -0.069 | Destabilizing | 0.068 | N | 0.204 | neutral | N | 0.477152254 | None | None | N |
K/S | 0.3874 | ambiguous | 0.3864 | ambiguous | -0.239 | Destabilizing | 0.939 | D | 0.377 | neutral | None | None | None | None | N |
K/T | 0.1347 | likely_benign | 0.1415 | benign | -0.141 | Destabilizing | 0.116 | N | 0.183 | neutral | N | 0.426667506 | None | None | N |
K/V | 0.2958 | likely_benign | 0.2987 | benign | 0.249 | Stabilizing | 0.969 | D | 0.426 | neutral | None | None | None | None | N |
K/W | 0.7432 | likely_pathogenic | 0.7123 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.533 | neutral | None | None | None | None | N |
K/Y | 0.6473 | likely_pathogenic | 0.6167 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.422 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.