Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19042 | 57349;57350;57351 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
N2AB | 17401 | 52426;52427;52428 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
N2A | 16474 | 49645;49646;49647 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
N2B | 9977 | 30154;30155;30156 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
Novex-1 | 10102 | 30529;30530;30531 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
Novex-2 | 10169 | 30730;30731;30732 | chr2:178598046;178598045;178598044 | chr2:179462773;179462772;179462771 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1471278707 | -0.266 | 0.928 | N | 0.526 | 0.144 | 0.203808441222 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1471278707 | -0.266 | 0.928 | N | 0.526 | 0.144 | 0.203808441222 | gnomAD-4.0.0 | 1.59434E-06 | None | None | None | None | N | None | 0 | 2.29158E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2256 | likely_benign | 0.1725 | benign | -0.709 | Destabilizing | 0.928 | D | 0.518 | neutral | N | 0.442829037 | None | None | N |
E/C | 0.9255 | likely_pathogenic | 0.8814 | pathogenic | -0.34 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/D | 0.254 | likely_benign | 0.2564 | benign | -0.567 | Destabilizing | 0.928 | D | 0.39 | neutral | N | 0.440788809 | None | None | N |
E/F | 0.8534 | likely_pathogenic | 0.7808 | pathogenic | -0.172 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/G | 0.3842 | ambiguous | 0.3034 | benign | -1.001 | Destabilizing | 0.978 | D | 0.637 | neutral | N | 0.437423217 | None | None | N |
E/H | 0.8089 | likely_pathogenic | 0.7347 | pathogenic | -0.155 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
E/I | 0.368 | ambiguous | 0.3057 | benign | 0.066 | Stabilizing | 0.992 | D | 0.759 | deleterious | None | None | None | None | N |
E/K | 0.5075 | ambiguous | 0.4028 | ambiguous | -0.052 | Destabilizing | 0.865 | D | 0.388 | neutral | N | 0.43603635 | None | None | N |
E/L | 0.4347 | ambiguous | 0.35 | ambiguous | 0.066 | Stabilizing | 0.983 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/M | 0.5274 | ambiguous | 0.4399 | ambiguous | 0.263 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.5064 | ambiguous | 0.4417 | ambiguous | -0.617 | Destabilizing | 0.983 | D | 0.614 | neutral | None | None | None | None | N |
E/P | 0.4722 | ambiguous | 0.3525 | ambiguous | -0.172 | Destabilizing | 0.997 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.3445 | ambiguous | 0.2869 | benign | -0.509 | Destabilizing | 0.928 | D | 0.526 | neutral | N | 0.472573154 | None | None | N |
E/R | 0.6779 | likely_pathogenic | 0.5668 | pathogenic | 0.234 | Stabilizing | 0.11 | N | 0.221 | neutral | None | None | None | None | N |
E/S | 0.4545 | ambiguous | 0.3628 | ambiguous | -0.814 | Destabilizing | 0.944 | D | 0.535 | neutral | None | None | None | None | N |
E/T | 0.3564 | ambiguous | 0.2863 | benign | -0.563 | Destabilizing | 0.983 | D | 0.667 | neutral | None | None | None | None | N |
E/V | 0.2193 | likely_benign | 0.1819 | benign | -0.172 | Destabilizing | 0.989 | D | 0.709 | prob.delet. | N | 0.456662339 | None | None | N |
E/W | 0.9585 | likely_pathogenic | 0.9372 | pathogenic | 0.126 | Stabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/Y | 0.7612 | likely_pathogenic | 0.6653 | pathogenic | 0.095 | Stabilizing | 0.997 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.