Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19069 | 57430;57431;57432 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
N2AB | 17428 | 52507;52508;52509 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
N2A | 16501 | 49726;49727;49728 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
N2B | 10004 | 30235;30236;30237 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
Novex-1 | 10129 | 30610;30611;30612 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
Novex-2 | 10196 | 30811;30812;30813 | chr2:178597965;178597964;178597963 | chr2:179462692;179462691;179462690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1477752765 | None | 1.0 | N | 0.717 | 0.42 | 0.494098832713 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1477752765 | None | 1.0 | N | 0.717 | 0.42 | 0.494098832713 | gnomAD-4.0.0 | 2.0301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5989 | likely_pathogenic | 0.5428 | ambiguous | -0.873 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
A/D | 0.9269 | likely_pathogenic | 0.8806 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.489739756 | None | None | I |
A/E | 0.8067 | likely_pathogenic | 0.7274 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
A/F | 0.6695 | likely_pathogenic | 0.6101 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
A/G | 0.3384 | likely_benign | 0.2813 | benign | -0.477 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.465595113 | None | None | I |
A/H | 0.8739 | likely_pathogenic | 0.8287 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
A/I | 0.4724 | ambiguous | 0.4264 | ambiguous | -0.507 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
A/K | 0.928 | likely_pathogenic | 0.8777 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
A/L | 0.5148 | ambiguous | 0.4357 | ambiguous | -0.507 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
A/M | 0.5431 | ambiguous | 0.4781 | ambiguous | -0.485 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
A/N | 0.8005 | likely_pathogenic | 0.7303 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
A/P | 0.9449 | likely_pathogenic | 0.9245 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.520974743 | None | None | I |
A/Q | 0.7953 | likely_pathogenic | 0.7189 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
A/R | 0.8582 | likely_pathogenic | 0.7803 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
A/S | 0.2055 | likely_benign | 0.185 | benign | -0.656 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.472395969 | None | None | I |
A/T | 0.3269 | likely_benign | 0.2643 | benign | -0.738 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.483916859 | None | None | I |
A/V | 0.2261 | likely_benign | 0.1989 | benign | -0.449 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.446600061 | None | None | I |
A/W | 0.9569 | likely_pathogenic | 0.9352 | pathogenic | -1.108 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
A/Y | 0.8585 | likely_pathogenic | 0.8131 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.