Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19074 | 57445;57446;57447 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
N2AB | 17433 | 52522;52523;52524 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
N2A | 16506 | 49741;49742;49743 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
N2B | 10009 | 30250;30251;30252 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
Novex-1 | 10134 | 30625;30626;30627 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
Novex-2 | 10201 | 30826;30827;30828 | chr2:178597950;178597949;178597948 | chr2:179462677;179462676;179462675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.999 | N | 0.853 | 0.434 | 0.604919980721 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8599E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0932 | likely_benign | 0.0987 | benign | -1.56 | Destabilizing | 0.767 | D | 0.451 | neutral | N | 0.477734659 | None | None | N |
P/C | 0.6829 | likely_pathogenic | 0.6857 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/D | 0.808 | likely_pathogenic | 0.8194 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/E | 0.6518 | likely_pathogenic | 0.6663 | pathogenic | -1.576 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
P/F | 0.716 | likely_pathogenic | 0.751 | pathogenic | -1.308 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/G | 0.6134 | likely_pathogenic | 0.6169 | pathogenic | -1.823 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.537 | ambiguous | 0.5262 | ambiguous | -1.275 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.521251005 | None | None | N |
P/I | 0.5946 | likely_pathogenic | 0.6114 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/K | 0.7948 | likely_pathogenic | 0.7979 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/L | 0.3806 | ambiguous | 0.3891 | ambiguous | -0.946 | Destabilizing | 0.999 | D | 0.78 | deleterious | N | 0.510411224 | None | None | N |
P/M | 0.6087 | likely_pathogenic | 0.6197 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/N | 0.7758 | likely_pathogenic | 0.7748 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
P/Q | 0.58 | likely_pathogenic | 0.5706 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/R | 0.6865 | likely_pathogenic | 0.6799 | pathogenic | -0.607 | Destabilizing | 0.999 | D | 0.853 | deleterious | N | 0.502132791 | None | None | N |
P/S | 0.307 | likely_benign | 0.2981 | benign | -1.399 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | N | 0.496599383 | None | None | N |
P/T | 0.2724 | likely_benign | 0.2636 | benign | -1.354 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | N | 0.504196706 | None | None | N |
P/V | 0.4199 | ambiguous | 0.4348 | ambiguous | -1.118 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/W | 0.836 | likely_pathogenic | 0.8443 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
P/Y | 0.7349 | likely_pathogenic | 0.7467 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.