Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19078 | 57457;57458;57459 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
N2AB | 17437 | 52534;52535;52536 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
N2A | 16510 | 49753;49754;49755 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
N2B | 10013 | 30262;30263;30264 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
Novex-1 | 10138 | 30637;30638;30639 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
Novex-2 | 10205 | 30838;30839;30840 | chr2:178597938;178597937;178597936 | chr2:179462665;179462664;179462663 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1452086800 | 0.455 | 0.294 | N | 0.68 | 0.196 | 0.324986149311 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/I | rs1452086800 | 0.455 | 0.294 | N | 0.68 | 0.196 | 0.324986149311 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0701 | likely_benign | 0.0677 | benign | -0.159 | Destabilizing | 0.005 | N | 0.235 | neutral | N | 0.428048799 | None | None | N |
T/C | 0.3606 | ambiguous | 0.3886 | ambiguous | -0.519 | Destabilizing | 0.989 | D | 0.644 | neutral | None | None | None | None | N |
T/D | 0.2996 | likely_benign | 0.2786 | benign | -0.224 | Destabilizing | 0.524 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/E | 0.2526 | likely_benign | 0.2225 | benign | -0.317 | Destabilizing | 0.355 | N | 0.676 | prob.neutral | None | None | None | None | N |
T/F | 0.3039 | likely_benign | 0.3023 | benign | -0.849 | Destabilizing | 0.794 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/G | 0.167 | likely_benign | 0.1663 | benign | -0.188 | Destabilizing | 0.185 | N | 0.597 | neutral | None | None | None | None | N |
T/H | 0.2692 | likely_benign | 0.2474 | benign | -0.273 | Destabilizing | 0.96 | D | 0.637 | neutral | None | None | None | None | N |
T/I | 0.1933 | likely_benign | 0.1725 | benign | -0.196 | Destabilizing | 0.294 | N | 0.68 | prob.neutral | N | 0.490769339 | None | None | N |
T/K | 0.1851 | likely_benign | 0.1473 | benign | -0.403 | Destabilizing | 0.003 | N | 0.45 | neutral | N | 0.495620585 | None | None | N |
T/L | 0.1066 | likely_benign | 0.1014 | benign | -0.196 | Destabilizing | 0.003 | N | 0.425 | neutral | None | None | None | None | N |
T/M | 0.0945 | likely_benign | 0.0967 | benign | -0.3 | Destabilizing | 0.794 | D | 0.657 | prob.neutral | None | None | None | None | N |
T/N | 0.1105 | likely_benign | 0.1022 | benign | -0.223 | Destabilizing | 0.524 | D | 0.633 | neutral | None | None | None | None | N |
T/P | 0.0781 | likely_benign | 0.0676 | benign | -0.163 | Destabilizing | 0.627 | D | 0.772 | deleterious | N | 0.486001024 | None | None | N |
T/Q | 0.2033 | likely_benign | 0.1797 | benign | -0.416 | Destabilizing | 0.794 | D | 0.781 | deleterious | None | None | None | None | N |
T/R | 0.1876 | likely_benign | 0.1524 | benign | -0.098 | Destabilizing | 0.294 | N | 0.723 | deleterious | N | 0.473820639 | None | None | N |
T/S | 0.0929 | likely_benign | 0.0912 | benign | -0.364 | Destabilizing | 0.013 | N | 0.332 | neutral | N | 0.409308322 | None | None | N |
T/V | 0.1435 | likely_benign | 0.1365 | benign | -0.163 | Destabilizing | 0.185 | N | 0.507 | neutral | None | None | None | None | N |
T/W | 0.6112 | likely_pathogenic | 0.6231 | pathogenic | -0.964 | Destabilizing | 0.989 | D | 0.67 | prob.neutral | None | None | None | None | N |
T/Y | 0.3389 | likely_benign | 0.329 | benign | -0.645 | Destabilizing | 0.96 | D | 0.662 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.