Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19083 | 57472;57473;57474 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
N2AB | 17442 | 52549;52550;52551 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
N2A | 16515 | 49768;49769;49770 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
N2B | 10018 | 30277;30278;30279 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
Novex-1 | 10143 | 30652;30653;30654 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
Novex-2 | 10210 | 30853;30854;30855 | chr2:178597923;178597922;178597921 | chr2:179462650;179462649;179462648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | None | N | 0.105 | 0.07 | 0.415564226483 | gnomAD-4.0.0 | 1.3689E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9964E-07 | 0 | 1.65717E-05 |
M/R | None | None | 0.475 | N | 0.658 | 0.2 | 0.533567079455 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6909 | likely_pathogenic | 0.6961 | pathogenic | -2.163 | Highly Destabilizing | 0.001 | N | 0.356 | neutral | None | None | None | None | N |
M/C | 0.8012 | likely_pathogenic | 0.7768 | pathogenic | -2.296 | Highly Destabilizing | 0.928 | D | 0.601 | neutral | None | None | None | None | N |
M/D | 0.9975 | likely_pathogenic | 0.9975 | pathogenic | -2.315 | Highly Destabilizing | 0.546 | D | 0.757 | deleterious | None | None | None | None | N |
M/E | 0.9791 | likely_pathogenic | 0.9776 | pathogenic | -2.092 | Highly Destabilizing | 0.372 | N | 0.646 | neutral | None | None | None | None | N |
M/F | 0.8409 | likely_pathogenic | 0.8589 | pathogenic | -0.675 | Destabilizing | 0.372 | N | 0.567 | neutral | None | None | None | None | N |
M/G | 0.9452 | likely_pathogenic | 0.9447 | pathogenic | -2.58 | Highly Destabilizing | 0.109 | N | 0.61 | neutral | None | None | None | None | N |
M/H | 0.9917 | likely_pathogenic | 0.9909 | pathogenic | -2.32 | Highly Destabilizing | 0.928 | D | 0.644 | neutral | None | None | None | None | N |
M/I | 0.5959 | likely_pathogenic | 0.5829 | pathogenic | -0.954 | Destabilizing | None | N | 0.105 | neutral | N | 0.406518733 | None | None | N |
M/K | 0.9558 | likely_pathogenic | 0.9492 | pathogenic | -1.469 | Destabilizing | 0.309 | N | 0.615 | neutral | N | 0.502429127 | None | None | N |
M/L | 0.3725 | ambiguous | 0.3649 | ambiguous | -0.954 | Destabilizing | 0.006 | N | 0.191 | neutral | N | 0.444244828 | None | None | N |
M/N | 0.9584 | likely_pathogenic | 0.9542 | pathogenic | -1.86 | Destabilizing | 0.808 | D | 0.711 | prob.delet. | None | None | None | None | N |
M/P | 0.8777 | likely_pathogenic | 0.891 | pathogenic | -1.344 | Destabilizing | 0.546 | D | 0.68 | prob.neutral | None | None | None | None | N |
M/Q | 0.902 | likely_pathogenic | 0.8948 | pathogenic | -1.532 | Destabilizing | 0.546 | D | 0.594 | neutral | None | None | None | None | N |
M/R | 0.9577 | likely_pathogenic | 0.9532 | pathogenic | -1.656 | Destabilizing | 0.475 | N | 0.658 | prob.neutral | N | 0.502949202 | None | None | N |
M/S | 0.9179 | likely_pathogenic | 0.9139 | pathogenic | -2.308 | Highly Destabilizing | 0.109 | N | 0.581 | neutral | None | None | None | None | N |
M/T | 0.7839 | likely_pathogenic | 0.7837 | pathogenic | -1.974 | Destabilizing | 0.156 | N | 0.555 | neutral | N | 0.454733968 | None | None | N |
M/V | 0.1896 | likely_benign | 0.1715 | benign | -1.344 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.377523978 | None | None | N |
M/W | 0.9927 | likely_pathogenic | 0.9929 | pathogenic | -1.046 | Destabilizing | 0.98 | D | 0.563 | neutral | None | None | None | None | N |
M/Y | 0.985 | likely_pathogenic | 0.9844 | pathogenic | -1.039 | Destabilizing | 0.546 | D | 0.667 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.