Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19084 | 57475;57476;57477 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
N2AB | 17443 | 52552;52553;52554 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
N2A | 16516 | 49771;49772;49773 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
N2B | 10019 | 30280;30281;30282 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
Novex-1 | 10144 | 30655;30656;30657 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
Novex-2 | 10211 | 30856;30857;30858 | chr2:178597920;178597919;178597918 | chr2:179462647;179462646;179462645 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1445268725 | -0.662 | 0.986 | N | 0.681 | 0.401 | 0.32714864917 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/T | rs1445268725 | -0.662 | 0.986 | N | 0.681 | 0.401 | 0.32714864917 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43394E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5397 | ambiguous | 0.5976 | pathogenic | -0.574 | Destabilizing | 0.963 | D | 0.521 | neutral | None | None | None | None | N |
K/C | 0.7632 | likely_pathogenic | 0.7897 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/D | 0.8215 | likely_pathogenic | 0.8544 | pathogenic | -0.352 | Destabilizing | 0.929 | D | 0.655 | prob.neutral | None | None | None | None | N |
K/E | 0.2754 | likely_benign | 0.313 | benign | -0.229 | Destabilizing | 0.058 | N | 0.211 | neutral | N | 0.494230931 | None | None | N |
K/F | 0.9068 | likely_pathogenic | 0.9259 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/G | 0.6922 | likely_pathogenic | 0.7347 | pathogenic | -0.964 | Destabilizing | 0.989 | D | 0.585 | neutral | None | None | None | None | N |
K/H | 0.4148 | ambiguous | 0.4443 | ambiguous | -1.369 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
K/I | 0.5461 | ambiguous | 0.5661 | pathogenic | 0.447 | Stabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
K/L | 0.5853 | likely_pathogenic | 0.6339 | pathogenic | 0.447 | Stabilizing | 0.989 | D | 0.604 | neutral | None | None | None | None | N |
K/M | 0.3798 | ambiguous | 0.4169 | ambiguous | 0.331 | Stabilizing | 0.999 | D | 0.637 | neutral | N | 0.462184391 | None | None | N |
K/N | 0.5921 | likely_pathogenic | 0.6372 | pathogenic | -0.566 | Destabilizing | 0.986 | D | 0.674 | prob.neutral | N | 0.488682437 | None | None | N |
K/P | 0.9704 | likely_pathogenic | 0.9742 | pathogenic | 0.137 | Stabilizing | 0.995 | D | 0.689 | prob.delet. | None | None | None | None | N |
K/Q | 0.1611 | likely_benign | 0.1791 | benign | -0.582 | Destabilizing | 0.972 | D | 0.695 | prob.delet. | N | 0.460156475 | None | None | N |
K/R | 0.0939 | likely_benign | 0.097 | benign | -0.769 | Destabilizing | 0.952 | D | 0.586 | neutral | N | 0.463873526 | None | None | N |
K/S | 0.6268 | likely_pathogenic | 0.6796 | pathogenic | -1.138 | Destabilizing | 0.963 | D | 0.595 | neutral | None | None | None | None | N |
K/T | 0.2675 | likely_benign | 0.2947 | benign | -0.805 | Destabilizing | 0.986 | D | 0.681 | prob.neutral | N | 0.467348951 | None | None | N |
K/V | 0.4557 | ambiguous | 0.4836 | ambiguous | 0.137 | Stabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/W | 0.884 | likely_pathogenic | 0.9057 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
K/Y | 0.846 | likely_pathogenic | 0.8681 | pathogenic | 0.187 | Stabilizing | 0.998 | D | 0.739 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.