Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19085 | 57478;57479;57480 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
N2AB | 17444 | 52555;52556;52557 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
N2A | 16517 | 49774;49775;49776 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
N2B | 10020 | 30283;30284;30285 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
Novex-1 | 10145 | 30658;30659;30660 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
Novex-2 | 10212 | 30859;30860;30861 | chr2:178597917;178597916;178597915 | chr2:179462644;179462643;179462642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.767 | 0.326 | 0.422762650823 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6269 | likely_pathogenic | 0.7698 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.502794486 | None | None | N |
D/C | 0.9497 | likely_pathogenic | 0.9712 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/E | 0.2826 | likely_benign | 0.3713 | ambiguous | -0.303 | Destabilizing | 0.999 | D | 0.443 | neutral | N | 0.451291018 | None | None | N |
D/F | 0.9719 | likely_pathogenic | 0.9836 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
D/G | 0.6046 | likely_pathogenic | 0.7225 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.482517145 | None | None | N |
D/H | 0.8449 | likely_pathogenic | 0.9102 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.476493665 | None | None | N |
D/I | 0.9247 | likely_pathogenic | 0.9545 | pathogenic | 0.197 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/K | 0.9076 | likely_pathogenic | 0.941 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
D/L | 0.9044 | likely_pathogenic | 0.9426 | pathogenic | 0.197 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
D/M | 0.957 | likely_pathogenic | 0.9766 | pathogenic | 0.284 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/N | 0.2813 | likely_benign | 0.3935 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.472770682 | None | None | N |
D/P | 0.8629 | likely_pathogenic | 0.9192 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
D/Q | 0.8185 | likely_pathogenic | 0.8928 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
D/R | 0.9365 | likely_pathogenic | 0.9593 | pathogenic | 0.295 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
D/S | 0.4699 | ambiguous | 0.6331 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
D/T | 0.7786 | likely_pathogenic | 0.873 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/V | 0.7921 | likely_pathogenic | 0.8654 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.745 | deleterious | N | 0.502231242 | None | None | N |
D/W | 0.9919 | likely_pathogenic | 0.9954 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
D/Y | 0.7876 | likely_pathogenic | 0.8562 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.484798551 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.