Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19096 | 57511;57512;57513 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
N2AB | 17455 | 52588;52589;52590 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
N2A | 16528 | 49807;49808;49809 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
N2B | 10031 | 30316;30317;30318 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
Novex-1 | 10156 | 30691;30692;30693 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
Novex-2 | 10223 | 30892;30893;30894 | chr2:178597796;178597795;178597794 | chr2:179462523;179462522;179462521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1559650624 | -0.062 | 0.998 | N | 0.636 | 0.39 | 0.365509141856 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.82E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1559650624 | -0.062 | 0.998 | N | 0.636 | 0.39 | 0.365509141856 | gnomAD-4.0.0 | 3.1855E-06 | None | None | None | None | N | None | 0 | 4.5798E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7958 | likely_pathogenic | 0.7825 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/D | 0.8877 | likely_pathogenic | 0.9194 | pathogenic | -0.57 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | N | 0.500789623 | None | None | N |
A/E | 0.8454 | likely_pathogenic | 0.8824 | pathogenic | -0.708 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
A/F | 0.7444 | likely_pathogenic | 0.7741 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
A/G | 0.4451 | ambiguous | 0.4468 | ambiguous | -0.346 | Destabilizing | 0.996 | D | 0.609 | neutral | N | 0.486321603 | None | None | N |
A/H | 0.888 | likely_pathogenic | 0.9048 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
A/I | 0.4984 | ambiguous | 0.5575 | ambiguous | -0.524 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
A/K | 0.9408 | likely_pathogenic | 0.9538 | pathogenic | -0.641 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/L | 0.4112 | ambiguous | 0.4868 | ambiguous | -0.524 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
A/M | 0.5218 | ambiguous | 0.5991 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/N | 0.681 | likely_pathogenic | 0.7541 | pathogenic | -0.369 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
A/P | 0.599 | likely_pathogenic | 0.6453 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.50123234 | None | None | N |
A/Q | 0.7805 | likely_pathogenic | 0.8246 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/R | 0.9012 | likely_pathogenic | 0.9132 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/S | 0.1983 | likely_benign | 0.2153 | benign | -0.574 | Destabilizing | 0.957 | D | 0.42 | neutral | N | 0.481779788 | None | None | N |
A/T | 0.2805 | likely_benign | 0.3417 | ambiguous | -0.64 | Destabilizing | 0.992 | D | 0.628 | neutral | N | 0.500616265 | None | None | N |
A/V | 0.2633 | likely_benign | 0.324 | benign | -0.442 | Destabilizing | 0.998 | D | 0.636 | neutral | N | 0.44874465 | None | None | N |
A/W | 0.9663 | likely_pathogenic | 0.9666 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/Y | 0.865 | likely_pathogenic | 0.8717 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.