Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19099 | 57520;57521;57522 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
N2AB | 17458 | 52597;52598;52599 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
N2A | 16531 | 49816;49817;49818 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
N2B | 10034 | 30325;30326;30327 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
Novex-1 | 10159 | 30700;30701;30702 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
Novex-2 | 10226 | 30901;30902;30903 | chr2:178597787;178597786;178597785 | chr2:179462514;179462513;179462512 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.324 | N | 0.441 | 0.189 | 0.282575091529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7731 | likely_pathogenic | 0.8071 | pathogenic | 0.035 | Stabilizing | 0.116 | N | 0.425 | neutral | None | None | None | None | I |
R/C | 0.6156 | likely_pathogenic | 0.6124 | pathogenic | -0.157 | Destabilizing | 0.981 | D | 0.386 | neutral | None | None | None | None | I |
R/D | 0.9308 | likely_pathogenic | 0.9432 | pathogenic | -0.042 | Destabilizing | 0.388 | N | 0.409 | neutral | None | None | None | None | I |
R/E | 0.7663 | likely_pathogenic | 0.7906 | pathogenic | 0.022 | Stabilizing | 0.116 | N | 0.394 | neutral | None | None | None | None | I |
R/F | 0.91 | likely_pathogenic | 0.9183 | pathogenic | -0.199 | Destabilizing | 0.932 | D | 0.396 | neutral | None | None | None | None | I |
R/G | 0.6092 | likely_pathogenic | 0.6567 | pathogenic | -0.156 | Destabilizing | 0.324 | N | 0.441 | neutral | N | 0.476584612 | None | None | I |
R/H | 0.3052 | likely_benign | 0.2907 | benign | -0.66 | Destabilizing | 0.818 | D | 0.414 | neutral | None | None | None | None | I |
R/I | 0.7545 | likely_pathogenic | 0.7826 | pathogenic | 0.5 | Stabilizing | 0.773 | D | 0.401 | neutral | N | 0.480711898 | None | None | I |
R/K | 0.112 | likely_benign | 0.1285 | benign | -0.045 | Destabilizing | None | N | 0.185 | neutral | N | 0.400390555 | None | None | I |
R/L | 0.6719 | likely_pathogenic | 0.6818 | pathogenic | 0.5 | Stabilizing | 0.388 | N | 0.441 | neutral | None | None | None | None | I |
R/M | 0.6882 | likely_pathogenic | 0.7081 | pathogenic | 0.04 | Stabilizing | 0.932 | D | 0.395 | neutral | None | None | None | None | I |
R/N | 0.8681 | likely_pathogenic | 0.8901 | pathogenic | 0.134 | Stabilizing | 0.388 | N | 0.395 | neutral | None | None | None | None | I |
R/P | 0.8881 | likely_pathogenic | 0.8928 | pathogenic | 0.365 | Stabilizing | 0.563 | D | 0.403 | neutral | None | None | None | None | I |
R/Q | 0.225 | likely_benign | 0.232 | benign | 0.06 | Stabilizing | 0.241 | N | 0.421 | neutral | None | None | None | None | I |
R/S | 0.8354 | likely_pathogenic | 0.8568 | pathogenic | -0.19 | Destabilizing | 0.09 | N | 0.434 | neutral | N | 0.507096733 | None | None | I |
R/T | 0.6583 | likely_pathogenic | 0.6725 | pathogenic | 0.007 | Stabilizing | 0.324 | N | 0.427 | neutral | N | 0.518911237 | None | None | I |
R/V | 0.7697 | likely_pathogenic | 0.7964 | pathogenic | 0.365 | Stabilizing | 0.388 | N | 0.427 | neutral | None | None | None | None | I |
R/W | 0.6112 | likely_pathogenic | 0.5834 | pathogenic | -0.278 | Destabilizing | 0.981 | D | 0.408 | neutral | None | None | None | None | I |
R/Y | 0.8335 | likely_pathogenic | 0.8329 | pathogenic | 0.14 | Stabilizing | 0.932 | D | 0.392 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.