Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19101 | 57526;57527;57528 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
N2AB | 17460 | 52603;52604;52605 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
N2A | 16533 | 49822;49823;49824 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
N2B | 10036 | 30331;30332;30333 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
Novex-1 | 10161 | 30706;30707;30708 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
Novex-2 | 10228 | 30907;30908;30909 | chr2:178597781;178597780;178597779 | chr2:179462508;179462507;179462506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs763313986 | -0.381 | 0.959 | N | 0.447 | 0.327 | 0.230578612272 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/G | rs763313986 | -0.381 | 0.959 | N | 0.447 | 0.327 | 0.230578612272 | gnomAD-4.0.0 | 1.59258E-06 | None | None | None | None | I | None | 5.66123E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | None | None | 0.92 | N | 0.431 | 0.223 | 0.250039746154 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8136 | likely_pathogenic | 0.8488 | pathogenic | -0.322 | Destabilizing | 0.863 | D | 0.38 | neutral | None | None | None | None | I |
R/C | 0.4005 | ambiguous | 0.4954 | ambiguous | -0.354 | Destabilizing | 0.999 | D | 0.419 | neutral | None | None | None | None | I |
R/D | 0.9228 | likely_pathogenic | 0.9408 | pathogenic | 0.032 | Stabilizing | 0.969 | D | 0.435 | neutral | None | None | None | None | I |
R/E | 0.7301 | likely_pathogenic | 0.7859 | pathogenic | 0.142 | Stabilizing | 0.863 | D | 0.351 | neutral | None | None | None | None | I |
R/F | 0.8864 | likely_pathogenic | 0.9118 | pathogenic | -0.259 | Destabilizing | 0.991 | D | 0.406 | neutral | None | None | None | None | I |
R/G | 0.5976 | likely_pathogenic | 0.6666 | pathogenic | -0.604 | Destabilizing | 0.959 | D | 0.447 | neutral | N | 0.399237683 | None | None | I |
R/H | 0.1756 | likely_benign | 0.216 | benign | -1.021 | Destabilizing | 0.1 | N | 0.266 | neutral | None | None | None | None | I |
R/I | 0.6975 | likely_pathogenic | 0.7521 | pathogenic | 0.415 | Stabilizing | 0.996 | D | 0.415 | neutral | N | 0.440604303 | None | None | I |
R/K | 0.1607 | likely_benign | 0.1701 | benign | -0.373 | Destabilizing | 0.061 | N | 0.163 | neutral | N | 0.358025779 | None | None | I |
R/L | 0.6356 | likely_pathogenic | 0.6952 | pathogenic | 0.415 | Stabilizing | 0.969 | D | 0.446 | neutral | None | None | None | None | I |
R/M | 0.6416 | likely_pathogenic | 0.7048 | pathogenic | -0.042 | Destabilizing | 0.997 | D | 0.426 | neutral | None | None | None | None | I |
R/N | 0.8347 | likely_pathogenic | 0.8595 | pathogenic | -0.007 | Destabilizing | 0.939 | D | 0.381 | neutral | None | None | None | None | I |
R/P | 0.9751 | likely_pathogenic | 0.9811 | pathogenic | 0.192 | Stabilizing | 0.997 | D | 0.418 | neutral | None | None | None | None | I |
R/Q | 0.1985 | likely_benign | 0.2374 | benign | -0.107 | Destabilizing | 0.939 | D | 0.438 | neutral | None | None | None | None | I |
R/S | 0.816 | likely_pathogenic | 0.8575 | pathogenic | -0.569 | Destabilizing | 0.92 | D | 0.431 | neutral | N | 0.40450743 | None | None | I |
R/T | 0.5798 | likely_pathogenic | 0.644 | pathogenic | -0.288 | Destabilizing | 0.959 | D | 0.453 | neutral | N | 0.389194048 | None | None | I |
R/V | 0.7555 | likely_pathogenic | 0.7943 | pathogenic | 0.192 | Stabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | I |
R/W | 0.5122 | ambiguous | 0.6141 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | I |
R/Y | 0.7455 | likely_pathogenic | 0.7908 | pathogenic | 0.249 | Stabilizing | 0.982 | D | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.