Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19108 | 57547;57548;57549 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
N2AB | 17467 | 52624;52625;52626 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
N2A | 16540 | 49843;49844;49845 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
N2B | 10043 | 30352;30353;30354 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
Novex-1 | 10168 | 30727;30728;30729 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
Novex-2 | 10235 | 30928;30929;30930 | chr2:178597760;178597759;178597758 | chr2:179462487;179462486;179462485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs774910035 | -1.71 | 0.999 | N | 0.739 | 0.365 | 0.356484672536 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
G/E | rs774910035 | -1.71 | 0.999 | N | 0.739 | 0.365 | 0.356484672536 | gnomAD-4.0.0 | 2.53246E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.23868E-05 | 1.15961E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1806 | likely_benign | 0.2783 | benign | -0.569 | Destabilizing | 0.767 | D | 0.453 | neutral | N | 0.499383248 | None | None | N |
G/C | 0.3613 | ambiguous | 0.4707 | ambiguous | -0.967 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/D | 0.5778 | likely_pathogenic | 0.7452 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/E | 0.5629 | ambiguous | 0.7328 | pathogenic | -1.097 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.426709499 | None | None | N |
G/F | 0.8751 | likely_pathogenic | 0.9323 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/H | 0.673 | likely_pathogenic | 0.8094 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/I | 0.7603 | likely_pathogenic | 0.8484 | pathogenic | -0.537 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
G/K | 0.6967 | likely_pathogenic | 0.8521 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
G/L | 0.7539 | likely_pathogenic | 0.8584 | pathogenic | -0.537 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
G/M | 0.6835 | likely_pathogenic | 0.7834 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
G/N | 0.4532 | ambiguous | 0.5891 | pathogenic | -0.712 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
G/P | 0.9934 | likely_pathogenic | 0.9963 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
G/Q | 0.5281 | ambiguous | 0.6825 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
G/R | 0.5765 | likely_pathogenic | 0.7778 | pathogenic | -0.607 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.502615554 | None | None | N |
G/S | 0.1296 | likely_benign | 0.1898 | benign | -0.896 | Destabilizing | 0.967 | D | 0.453 | neutral | None | None | None | None | N |
G/T | 0.3151 | likely_benign | 0.4046 | ambiguous | -0.969 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/V | 0.5707 | likely_pathogenic | 0.7123 | pathogenic | -0.512 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | N | 0.479254099 | None | None | N |
G/W | 0.7997 | likely_pathogenic | 0.8806 | pathogenic | -1.404 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.479507588 | None | None | N |
G/Y | 0.7746 | likely_pathogenic | 0.8694 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.