Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19113 | 57562;57563;57564 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
N2AB | 17472 | 52639;52640;52641 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
N2A | 16545 | 49858;49859;49860 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
N2B | 10048 | 30367;30368;30369 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
Novex-1 | 10173 | 30742;30743;30744 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
Novex-2 | 10240 | 30943;30944;30945 | chr2:178597745;178597744;178597743 | chr2:179462472;179462471;179462470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.997 | N | 0.591 | 0.401 | 0.817057561884 | gnomAD-4.0.0 | 1.59239E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02627E-05 |
I/V | rs2052104416 | None | 0.798 | N | 0.4 | 0.143 | 0.59589940523 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
I/V | rs2052104416 | None | 0.798 | N | 0.4 | 0.143 | 0.59589940523 | gnomAD-4.0.0 | 2.56395E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.68053E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7606 | likely_pathogenic | 0.8323 | pathogenic | -1.724 | Destabilizing | 0.992 | D | 0.438 | neutral | None | None | None | None | I |
I/C | 0.9377 | likely_pathogenic | 0.9517 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
I/D | 0.982 | likely_pathogenic | 0.9886 | pathogenic | -0.61 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | I |
I/E | 0.968 | likely_pathogenic | 0.9737 | pathogenic | -0.539 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | I |
I/F | 0.468 | ambiguous | 0.5903 | pathogenic | -1.057 | Destabilizing | 0.994 | D | 0.587 | neutral | N | 0.455097406 | None | None | I |
I/G | 0.9558 | likely_pathogenic | 0.9708 | pathogenic | -2.113 | Highly Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
I/H | 0.9125 | likely_pathogenic | 0.9386 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
I/K | 0.9073 | likely_pathogenic | 0.9325 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
I/L | 0.1638 | likely_benign | 0.1913 | benign | -0.701 | Destabilizing | 0.054 | N | 0.243 | neutral | N | 0.443533618 | None | None | I |
I/M | 0.1965 | likely_benign | 0.258 | benign | -0.603 | Destabilizing | 0.994 | D | 0.595 | neutral | N | 0.478704984 | None | None | I |
I/N | 0.8161 | likely_pathogenic | 0.8747 | pathogenic | -0.798 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.426619938 | None | None | I |
I/P | 0.9059 | likely_pathogenic | 0.9634 | pathogenic | -1.012 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
I/Q | 0.9062 | likely_pathogenic | 0.9232 | pathogenic | -0.864 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
I/R | 0.8546 | likely_pathogenic | 0.8956 | pathogenic | -0.498 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
I/S | 0.7962 | likely_pathogenic | 0.8552 | pathogenic | -1.591 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.451035593 | None | None | I |
I/T | 0.5654 | likely_pathogenic | 0.6783 | pathogenic | -1.388 | Destabilizing | 0.997 | D | 0.591 | neutral | N | 0.42896681 | None | None | I |
I/V | 0.1842 | likely_benign | 0.2291 | benign | -1.012 | Destabilizing | 0.798 | D | 0.4 | neutral | N | 0.448728794 | None | None | I |
I/W | 0.9391 | likely_pathogenic | 0.9597 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
I/Y | 0.868 | likely_pathogenic | 0.9096 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.