Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19116 | 57571;57572;57573 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
N2AB | 17475 | 52648;52649;52650 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
N2A | 16548 | 49867;49868;49869 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
N2B | 10051 | 30376;30377;30378 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
Novex-1 | 10176 | 30751;30752;30753 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
Novex-2 | 10243 | 30952;30953;30954 | chr2:178597736;178597735;178597734 | chr2:179462463;179462462;179462461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2052100792 | None | 1.0 | D | 0.774 | 0.525 | 0.805721141949 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs2052100792 | None | 1.0 | D | 0.774 | 0.525 | 0.805721141949 | gnomAD-4.0.0 | 6.57765E-06 | None | None | None | None | I | None | 0 | 6.55222E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.748 | likely_pathogenic | 0.8349 | pathogenic | -0.617 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.521562832 | None | None | I |
V/C | 0.8945 | likely_pathogenic | 0.9118 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
V/D | 0.9892 | likely_pathogenic | 0.9941 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
V/E | 0.9631 | likely_pathogenic | 0.9781 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.597837834 | None | None | I |
V/F | 0.4711 | ambiguous | 0.606 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
V/G | 0.8823 | likely_pathogenic | 0.9286 | pathogenic | -0.811 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.581818473 | None | None | I |
V/H | 0.9688 | likely_pathogenic | 0.9831 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
V/I | 0.0839 | likely_benign | 0.0817 | benign | -0.237 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | I |
V/K | 0.959 | likely_pathogenic | 0.9756 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
V/L | 0.4547 | ambiguous | 0.5365 | ambiguous | -0.237 | Destabilizing | 0.997 | D | 0.671 | neutral | D | 0.538444762 | None | None | I |
V/M | 0.4686 | ambiguous | 0.5549 | ambiguous | -0.359 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.597434225 | None | None | I |
V/N | 0.9556 | likely_pathogenic | 0.9731 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
V/P | 0.9871 | likely_pathogenic | 0.9918 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
V/Q | 0.9361 | likely_pathogenic | 0.9603 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
V/R | 0.9332 | likely_pathogenic | 0.9606 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
V/S | 0.8817 | likely_pathogenic | 0.9263 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
V/T | 0.745 | likely_pathogenic | 0.7988 | pathogenic | -0.673 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
V/W | 0.9796 | likely_pathogenic | 0.989 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/Y | 0.905 | likely_pathogenic | 0.9425 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.