Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19127 | 57604;57605;57606 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
N2AB | 17486 | 52681;52682;52683 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
N2A | 16559 | 49900;49901;49902 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
N2B | 10062 | 30409;30410;30411 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
Novex-1 | 10187 | 30784;30785;30786 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
Novex-2 | 10254 | 30985;30986;30987 | chr2:178597703;178597702;178597701 | chr2:179462430;179462429;179462428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.157 | 0.132 | 0.0297737177859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1335 | likely_benign | 0.15 | benign | -0.978 | Destabilizing | 0.003 | N | 0.443 | neutral | None | None | None | None | N |
N/C | 0.1359 | likely_benign | 0.1469 | benign | -0.464 | Destabilizing | None | N | 0.341 | neutral | None | None | None | None | N |
N/D | 0.1181 | likely_benign | 0.1572 | benign | -1.651 | Destabilizing | 0.012 | N | 0.399 | neutral | N | 0.440969663 | None | None | N |
N/E | 0.2056 | likely_benign | 0.2536 | benign | -1.491 | Destabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | N |
N/F | 0.2737 | likely_benign | 0.2691 | benign | -0.82 | Destabilizing | 0.356 | N | 0.636 | neutral | None | None | None | None | N |
N/G | 0.1941 | likely_benign | 0.2225 | benign | -1.329 | Destabilizing | 0.016 | N | 0.367 | neutral | None | None | None | None | N |
N/H | 0.0777 | likely_benign | 0.0818 | benign | -1.003 | Destabilizing | 0.295 | N | 0.495 | neutral | N | 0.432984898 | None | None | N |
N/I | 0.1217 | likely_benign | 0.1354 | benign | -0.068 | Destabilizing | 0.012 | N | 0.497 | neutral | N | 0.413532345 | None | None | N |
N/K | 0.163 | likely_benign | 0.2236 | benign | -0.231 | Destabilizing | 0.012 | N | 0.375 | neutral | N | 0.382825436 | None | None | N |
N/L | 0.125 | likely_benign | 0.1265 | benign | -0.068 | Destabilizing | 0.016 | N | 0.491 | neutral | None | None | None | None | N |
N/M | 0.1652 | likely_benign | 0.1687 | benign | 0.348 | Stabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
N/P | 0.9193 | likely_pathogenic | 0.9482 | pathogenic | -0.343 | Destabilizing | 0.072 | N | 0.589 | neutral | None | None | None | None | N |
N/Q | 0.1692 | likely_benign | 0.1965 | benign | -1.118 | Destabilizing | 0.072 | N | 0.469 | neutral | None | None | None | None | N |
N/R | 0.1894 | likely_benign | 0.2407 | benign | -0.233 | Destabilizing | 0.072 | N | 0.42 | neutral | None | None | None | None | N |
N/S | 0.0639 | likely_benign | 0.0672 | benign | -1.135 | Destabilizing | None | N | 0.157 | neutral | N | 0.345827273 | None | None | N |
N/T | 0.0678 | likely_benign | 0.0724 | benign | -0.787 | Destabilizing | None | N | 0.184 | neutral | N | 0.369106777 | None | None | N |
N/V | 0.127 | likely_benign | 0.1406 | benign | -0.343 | Destabilizing | None | N | 0.357 | neutral | None | None | None | None | N |
N/W | 0.5719 | likely_pathogenic | 0.5818 | pathogenic | -0.637 | Destabilizing | 0.864 | D | 0.601 | neutral | None | None | None | None | N |
N/Y | 0.1058 | likely_benign | 0.1072 | benign | -0.313 | Destabilizing | 0.295 | N | 0.625 | neutral | N | 0.37554996 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.